RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 NISCHQ9Y2I1 1504 aa41.57■■■■■ 4.25
SCAMP4-203ENST00000411971 CCDC180Q9P1Z9 1646 aa37.24■■■■□ 3.55
SCAMP4-203ENST00000411971 ABCC9O60706 1549 aa37.2■■■■□ 3.55
SCAMP4-203ENST00000411971 RB1CC1Q8TDY2 1594 aa35.35■■■■□ 3.25
SCAMP4-203ENST00000411971 NACADO15069 1562 aa35.13■■■■□ 3.21
SCAMP4-203ENST00000411971 DCAF8L2P0C7V8 631 aa34.97■■■■□ 3.19
SCAMP4-203ENST00000411971 DNAJC5BQ9UF47 199 aa34.92■■■■□ 3.18
SCAMP4-203ENST00000411971 UNC13AQ9UPW8 1703 aa34.79■■■■□ 3.16
SCAMP4-203ENST00000411971 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
SCAMP4-203ENST00000411971 PABPN1Q86U42 306 aaKnown RBP eCLIP34.65■■■■□ 3.14
SCAMP4-203ENST00000411971 BICRAQ9NZM4 1560 aa34.49■■■■□ 3.11
SCAMP4-203ENST00000411971 ZCCHC6Q5VYS8 1495 aaKnown RBP34.49■■■■□ 3.11
SCAMP4-203ENST00000411971 DCAF1Q9Y4B6 1507 aa34.28■■■■□ 3.08
SCAMP4-203ENST00000411971 SCRIBQ14160 1630 aa34.01■■■■□ 3.04
SCAMP4-203ENST00000411971 SHROOM4Q9ULL8 1493 aa33.78■■■■□ 3
SCAMP4-203ENST00000411971 CC2D2AQ9P2K1 1620 aa33.62■■■□□ 2.97
SCAMP4-203ENST00000411971 EIF4G1Q04637 1599 aaKnown RBP33.55■■■□□ 2.96
SCAMP4-203ENST00000411971 CECR2Q9BXF3 1484 aa33.44■■■□□ 2.94
SCAMP4-203ENST00000411971 NCAPD3P42695 1498 aa32.46■■■□□ 2.79
SCAMP4-203ENST00000411971 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
SCAMP4-203ENST00000411971 ATAD2BQ9ULI0 1458 aa32.42■■■□□ 2.78
SCAMP4-203ENST00000411971 SMARCA2P51531 1590 aa32.25■■■□□ 2.75
SCAMP4-203ENST00000411971 HMGXB3Q12766 1538 aa32.23■■■□□ 2.75
SCAMP4-203ENST00000411971 BAZ1AQ9NRL2 1556 aaPredicted RBP32.2■■■□□ 2.75
SCAMP4-203ENST00000411971 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
SCAMP4-203ENST00000411971 PEG3Q9GZU2 1588 aa32.09■■■□□ 2.73
SCAMP4-203ENST00000411971 BAZ1BQ9UIG0 1483 aaKnown RBP32.05■■■□□ 2.72
SCAMP4-203ENST00000411971 NESP48681 1621 aa32.05■■■□□ 2.72
SCAMP4-203ENST00000411971 ERCC6Q03468 1493 aa31.98■■■□□ 2.71
SCAMP4-203ENST00000411971 CUX2O14529 1486 aa31.91■■■□□ 2.7
SCAMP4-203ENST00000411971 DNAJC5Q9H3Z4 198 aa31.82■■■□□ 2.68
SCAMP4-203ENST00000411971 WIZO95785 1651 aa31.76■■■□□ 2.67
SCAMP4-203ENST00000411971 LAMC3Q9Y6N6 1575 aa31.7■■■□□ 2.67
SCAMP4-203ENST00000411971 THOC2Q8NI27 1593 aaKnown RBP31.68■■■□□ 2.66
SCAMP4-203ENST00000411971 KIF21AQ7Z4S6 1674 aa31.65■■■□□ 2.66
SCAMP4-203ENST00000411971 CADPSQ9ULU8 1353 aa31.46■■■□□ 2.63
SCAMP4-203ENST00000411971 PDS5BQ9NTI5 1447 aa31.44■■■□□ 2.62
SCAMP4-203ENST00000411971 RSF1Q96T23 1441 aaPredicted RBP31.42■■■□□ 2.62
SCAMP4-203ENST00000411971 TOP2AP11388 1531 aaKnown RBP31.25■■■□□ 2.59
SCAMP4-203ENST00000411971 MRC2Q9UBG0 1479 aa31.24■■■□□ 2.59
SCAMP4-203ENST00000411971 WDR62O43379 1518 aa31.2■■■□□ 2.59
SCAMP4-203ENST00000411971 CFTRP13569 1480 aa31.15■■■□□ 2.58
SCAMP4-203ENST00000411971 FANCD2Q9BXW9 1451 aa31.14■■■□□ 2.57
SCAMP4-203ENST00000411971 CEP164Q9UPV0 1460 aa31.12■■■□□ 2.57
SCAMP4-203ENST00000411971 URB2Q14146 1524 aaKnown RBP30.95■■■□□ 2.55
SCAMP4-203ENST00000411971 CCDC88BA6NC98 1476 aa30.94■■■□□ 2.54
SCAMP4-203ENST00000411971 PRDM2Q13029 1718 aa30.92■■■□□ 2.54
SCAMP4-203ENST00000411971 TOPBP1Q92547 1522 aa30.59■■■□□ 2.49
SCAMP4-203ENST00000411971 ZNF608Q9ULD9 1512 aaPredicted RBP30.57■■■□□ 2.48
SCAMP4-203ENST00000411971 IFT140Q96RY7 1462 aa30.49■■■□□ 2.47
SCAMP4-203ENST00000411971 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
SCAMP4-203ENST00000411971 DNMBPQ6XZF7 1577 aa30.45■■■□□ 2.47
SCAMP4-203ENST00000411971 OSCARQ8IYS5 282 aa30.43■■■□□ 2.46
SCAMP4-203ENST00000411971 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
SCAMP4-203ENST00000411971 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
SCAMP4-203ENST00000411971 TARBP1Q13395 1621 aaKnown RBP30.36■■■□□ 2.45
SCAMP4-203ENST00000411971 POLA1P09884 1462 aaPredicted RBP30.29■■■□□ 2.44
SCAMP4-203ENST00000411971 AQRO60306 1485 aaKnown RBP eCLIP30.26■■■□□ 2.446e-12■■■■■ 56.8
SCAMP4-203ENST00000411971 RAD54L2Q9Y4B4 1467 aa30.22■■■□□ 2.43
SCAMP4-203ENST00000411971 RIMBP3CA6NJZ7 1639 aa30.19■■■□□ 2.42
SCAMP4-203ENST00000411971 RIMBP3BA6NNM3 1639 aa30.19■■■□□ 2.42
SCAMP4-203ENST00000411971 RIMBP3Q9UFD9 1639 aa30.19■■■□□ 2.42
SCAMP4-203ENST00000411971 CHD1O14646 1710 aa30.18■■■□□ 2.42
SCAMP4-203ENST00000411971 CUX1P39880 1505 aa30.14■■■□□ 2.42
SCAMP4-203ENST00000411971 FGD5Q6ZNL6 1462 aa30.11■■■□□ 2.41
SCAMP4-203ENST00000411971 SOGA1O94964 1423 aa30.09■■■□□ 2.41
SCAMP4-203ENST00000411971 TDRD9Q8NDG6 1382 aaKnown RBP30.07■■■□□ 2.4
SCAMP4-203ENST00000411971 SUPT5HO00267 1087 aaKnown RBP30.07■■■□□ 2.4
SCAMP4-203ENST00000411971 ARHGEF11O15085 1522 aa30.06■■■□□ 2.4
SCAMP4-203ENST00000411971 WDR97A6NE52 1622 aa29.96■■■□□ 2.39
SCAMP4-203ENST00000411971 FBLN2P98095 1184 aa29.93■■■□□ 2.38
SCAMP4-203ENST00000411971 SNAPC4Q5SXM2 1469 aa29.93■■■□□ 2.38
SCAMP4-203ENST00000411971 ARAP1Q96P48 1450 aa29.81■■■□□ 2.36
SCAMP4-203ENST00000411971 PBRM1Q86U86 1689 aa29.81■■■□□ 2.36
SCAMP4-203ENST00000411971 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
SCAMP4-203ENST00000411971 CLASP1Q7Z460 1538 aa29.79■■■□□ 2.36
SCAMP4-203ENST00000411971 CYB5RLQ6IPT4 315 aa29.78■■■□□ 2.36
SCAMP4-203ENST00000411971 MAGI1Q96QZ7 1491 aaPredicted RBP29.78■■■□□ 2.36
SCAMP4-203ENST00000411971 ABCA5Q8WWZ7 1642 aa29.75■■■□□ 2.35
SCAMP4-203ENST00000411971 ABCA10Q8WWZ4 1543 aa29.74■■■□□ 2.35
SCAMP4-203ENST00000411971 GAPVD1Q14C86 1478 aa29.73■■■□□ 2.35
SCAMP4-203ENST00000411971 SYNJ2O15056 1496 aa29.7■■■□□ 2.35
SCAMP4-203ENST00000411971 CHMP7Q8WUX9 453 aaPredicted RBP29.7■■■□□ 2.35
SCAMP4-203ENST00000411971 SYNJ1O43426 1573 aa29.68■■■□□ 2.34
SCAMP4-203ENST00000411971 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
SCAMP4-203ENST00000411971 TOP2BQ02880 1626 aa29.63■■■□□ 2.33
SCAMP4-203ENST00000411971 WRNQ14191 1432 aaPredicted RBP eCLIP29.58■■■□□ 2.33
SCAMP4-203ENST00000411971 ADAMTS12P58397 1594 aa29.5■■■□□ 2.31
SCAMP4-203ENST00000411971 GRIN2AQ12879 1464 aa29.46■■■□□ 2.31
SCAMP4-203ENST00000411971 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
SCAMP4-203ENST00000411971 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
SCAMP4-203ENST00000411971 NUP160Q12769 1436 aa29.37■■■□□ 2.29
SCAMP4-203ENST00000411971 TRHP20396 242 aaPredicted RBP29.36■■■□□ 2.29
SCAMP4-203ENST00000411971 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
SCAMP4-203ENST00000411971 FHAD1B1AJZ9 1412 aa29.33■■■□□ 2.29
SCAMP4-203ENST00000411971 SHROOM2Q13796 1616 aa29.27■■■□□ 2.28
SCAMP4-203ENST00000411971 RUSC2Q8N2Y8 1516 aa29.09■■■□□ 2.25
SCAMP4-203ENST00000411971 PRG4Q92954 1404 aaPredicted RBP29.06■■■□□ 2.24
SCAMP4-203ENST00000411971 IGF1RP08069 1367 aa29.03■■■□□ 2.24
SCAMP4-203ENST00000411971 JPH4Q96JJ6 628 aa29.01■■■□□ 2.23
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