RNA–Protein interactions for RNA: ENST00000415442.2

TROVE2-207, Transcript of TROVE domain family member 2, humanhuman

TSL 3

Gene TROVE2, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-207ENST00000415442 NISCHQ9Y2I1 1504 aa38.81■■■■□ 3.8
TROVE2-207ENST00000415442 ABCC9O60706 1549 aa34.84■■■■□ 3.17
TROVE2-207ENST00000415442 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
TROVE2-207ENST00000415442 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
TROVE2-207ENST00000415442 NACADO15069 1562 aa32.94■■■□□ 2.86
TROVE2-207ENST00000415442 DNAJC5BQ9UF47 199 aa32.76■■■□□ 2.83
TROVE2-207ENST00000415442 DCAF8L2P0C7V8 631 aa32.75■■■□□ 2.83
TROVE2-207ENST00000415442 MYO15BQ96JP2 1530 aa32.56■■■□□ 2.8
TROVE2-207ENST00000415442 PABPN1Q86U42 306 aaKnown RBP eCLIP32.47■■■□□ 2.79
TROVE2-207ENST00000415442 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
TROVE2-207ENST00000415442 BICRAQ9NZM4 1560 aa32.15■■■□□ 2.74
TROVE2-207ENST00000415442 UNC13AQ9UPW8 1703 aa32.11■■■□□ 2.73
TROVE2-207ENST00000415442 DCAF1Q9Y4B6 1507 aa32.1■■■□□ 2.73
TROVE2-207ENST00000415442 SHROOM4Q9ULL8 1493 aa31.86■■■□□ 2.69
TROVE2-207ENST00000415442 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
TROVE2-207ENST00000415442 CECR2Q9BXF3 1484 aa31.43■■■□□ 2.62
TROVE2-207ENST00000415442 CC2D2AQ9P2K1 1620 aa31.42■■■□□ 2.62
TROVE2-207ENST00000415442 EIF4G1Q04637 1599 aaKnown RBP31.39■■■□□ 2.61
TROVE2-207ENST00000415442 NCAPD3P42695 1498 aa30.49■■■□□ 2.47
TROVE2-207ENST00000415442 ATAD2BQ9ULI0 1458 aa30.35■■■□□ 2.45
TROVE2-207ENST00000415442 SMARCA2P51531 1590 aa30.22■■■□□ 2.43
TROVE2-207ENST00000415442 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
TROVE2-207ENST00000415442 HMGXB3Q12766 1538 aa30.18■■■□□ 2.42
TROVE2-207ENST00000415442 DNAJC5Q9H3Z4 198 aa30.16■■■□□ 2.42
TROVE2-207ENST00000415442 BAZ1AQ9NRL2 1556 aaPredicted RBP30.12■■■□□ 2.41
TROVE2-207ENST00000415442 CUX2O14529 1486 aa30.11■■■□□ 2.41
TROVE2-207ENST00000415442 ERCC6Q03468 1493 aa30.1■■■□□ 2.41
TROVE2-207ENST00000415442 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
TROVE2-207ENST00000415442 PEG3Q9GZU2 1588 aa29.99■■■□□ 2.39
TROVE2-207ENST00000415442 NESP48681 1621 aa29.89■■■□□ 2.38
TROVE2-207ENST00000415442 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
TROVE2-207ENST00000415442 LAMC3Q9Y6N6 1575 aa29.7■■■□□ 2.35
TROVE2-207ENST00000415442 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
TROVE2-207ENST00000415442 THOC2Q8NI27 1593 aaKnown RBP29.56■■■□□ 2.32
TROVE2-207ENST00000415442 CADPSQ9ULU8 1353 aa29.56■■■□□ 2.32
TROVE2-207ENST00000415442 WIZO95785 1651 aa29.4■■■□□ 2.3
TROVE2-207ENST00000415442 KIF21AQ7Z4S6 1674 aa29.35■■■□□ 2.29
TROVE2-207ENST00000415442 MRC2Q9UBG0 1479 aa29.32■■■□□ 2.28
TROVE2-207ENST00000415442 RSF1Q96T23 1441 aaPredicted RBP29.3■■■□□ 2.28
TROVE2-207ENST00000415442 WDR62O43379 1518 aa29.24■■■□□ 2.27
TROVE2-207ENST00000415442 CFTRP13569 1480 aa29.2■■■□□ 2.26
TROVE2-207ENST00000415442 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
TROVE2-207ENST00000415442 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
TROVE2-207ENST00000415442 TOP2AP11388 1531 aaKnown RBP29.15■■■□□ 2.26
TROVE2-207ENST00000415442 URB2Q14146 1524 aaKnown RBP28.89■■■□□ 2.22
TROVE2-207ENST00000415442 CCDC88BA6NC98 1476 aa28.84■■■□□ 2.21
TROVE2-207ENST00000415442 OSCARQ8IYS5 282 aa28.76■■■□□ 2.19
TROVE2-207ENST00000415442 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
TROVE2-207ENST00000415442 IFT140Q96RY7 1462 aa28.65■■■□□ 2.18
TROVE2-207ENST00000415442 TOPBP1Q92547 1522 aa28.59■■■□□ 2.17
TROVE2-207ENST00000415442 ABCC8Q09428 1581 aa28.58■■■□□ 2.17
TROVE2-207ENST00000415442 PRDM2Q13029 1718 aa28.57■■■□□ 2.16
TROVE2-207ENST00000415442 ZNF608Q9ULD9 1512 aaPredicted RBP28.55■■■□□ 2.16
TROVE2-207ENST00000415442 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.15
TROVE2-207ENST00000415442 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
TROVE2-207ENST00000415442 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.122e-6■■■□□ 15.2
TROVE2-207ENST00000415442 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
TROVE2-207ENST00000415442 TARBP1Q13395 1621 aaKnown RBP28.28■■■□□ 2.12
TROVE2-207ENST00000415442 ARHGEF11O15085 1522 aa28.22■■■□□ 2.11
TROVE2-207ENST00000415442 RIMBP3CA6NJZ7 1639 aa28.21■■■□□ 2.11
TROVE2-207ENST00000415442 RIMBP3BA6NNM3 1639 aa28.21■■■□□ 2.11
TROVE2-207ENST00000415442 RIMBP3Q9UFD9 1639 aa28.21■■■□□ 2.11
TROVE2-207ENST00000415442 SOGA1O94964 1423 aa28.2■■■□□ 2.11
TROVE2-207ENST00000415442 RAD54L2Q9Y4B4 1467 aa28.19■■■□□ 2.1
TROVE2-207ENST00000415442 TDRD9Q8NDG6 1382 aaKnown RBP28.14■■■□□ 2.1
TROVE2-207ENST00000415442 FBLN2P98095 1184 aa28.12■■■□□ 2.09
TROVE2-207ENST00000415442 FGD5Q6ZNL6 1462 aa28.11■■■□□ 2.09
TROVE2-207ENST00000415442 CUX1P39880 1505 aa28.06■■■□□ 2.08
TROVE2-207ENST00000415442 WDR97A6NE52 1622 aa28.05■■■□□ 2.08
TROVE2-207ENST00000415442 CYB5RLQ6IPT4 315 aa28.05■■■□□ 2.08
TROVE2-207ENST00000415442 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
TROVE2-207ENST00000415442 CHD1O14646 1710 aa27.98■■■□□ 2.07
TROVE2-207ENST00000415442 GRIN2BQ13224 1484 aa27.96■■■□□ 2.07
TROVE2-207ENST00000415442 MAGI1Q96QZ7 1491 aaPredicted RBP27.96■■■□□ 2.07
TROVE2-207ENST00000415442 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
TROVE2-207ENST00000415442 ARAP1Q96P48 1450 aa27.95■■■□□ 2.06
TROVE2-207ENST00000415442 SUPT5HO00267 1087 aaKnown RBP27.93■■■□□ 2.06
TROVE2-207ENST00000415442 SYNJ2O15056 1496 aa27.87■■■□□ 2.05
TROVE2-207ENST00000415442 CLASP1Q7Z460 1538 aa27.86■■■□□ 2.05
TROVE2-207ENST00000415442 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.05
TROVE2-207ENST00000415442 ABCA10Q8WWZ4 1543 aa27.82■■■□□ 2.04
TROVE2-207ENST00000415442 SYNJ1O43426 1573 aa27.82■■■□□ 2.04
TROVE2-207ENST00000415442 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.034e-8■■■■■ 27.9
TROVE2-207ENST00000415442 TRHP20396 242 aaPredicted RBP27.72■■■□□ 2.03
TROVE2-207ENST00000415442 ABCA5Q8WWZ7 1642 aa27.7■■■□□ 2.02
TROVE2-207ENST00000415442 PBRM1Q86U86 1689 aa27.62■■■□□ 2.01
TROVE2-207ENST00000415442 GRIN2AQ12879 1464 aa27.58■■■□□ 2.01
TROVE2-207ENST00000415442 TOP2BQ02880 1626 aa27.58■■■□□ 2.01
TROVE2-207ENST00000415442 BIVM-ERCC5R4GMW8 1640 aa27.53■■■□□ 2
TROVE2-207ENST00000415442 NUP160Q12769 1436 aa27.53■■■□□ 2
TROVE2-207ENST00000415442 FHAD1B1AJZ9 1412 aa27.52■■■□□ 2
TROVE2-207ENST00000415442 ADAMTS12P58397 1594 aa27.5■■□□□ 1.99
TROVE2-207ENST00000415442 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
TROVE2-207ENST00000415442 CEP170Q5SW79 1584 aa27.42■■□□□ 1.98
TROVE2-207ENST00000415442 ERCC6L2Q5T890 1561 aa27.36■■□□□ 1.97
TROVE2-207ENST00000415442 SHROOM2Q13796 1616 aa27.3■■□□□ 1.96
TROVE2-207ENST00000415442 JPH4Q96JJ6 628 aa27.26■■□□□ 1.95
TROVE2-207ENST00000415442 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
TROVE2-207ENST00000415442 IGF1RP08069 1367 aa27.16■■□□□ 1.94
TROVE2-207ENST00000415442 KIF27Q86VH2 1401 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms