RNA–Protein interactions for RNA: ENST00000471298.2

CEACAM1-210, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5

Gene CEACAM1, Length 417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-210ENST00000471298 AEBP2Q6ZN18 517 aaPredicted RBP10.4□□□□□ -0.74
CEACAM1-210ENST00000471298 CHIC1Q5VXU3 224 aa9.86□□□□□ -0.83
CEACAM1-210ENST00000471298 SENP3Q9H4L4 574 aaPredicted RBP9.09□□□□□ -0.95
CEACAM1-210ENST00000471298 PHF23Q9BUL5 403 aaPredicted RBP8.82□□□□□ -1
CEACAM1-210ENST00000471298 POTEDQ86YR6 584 aa8.66□□□□□ -1.02
CEACAM1-210ENST00000471298 FOXD1Q16676 465 aa8.43□□□□□ -1.06
CEACAM1-210ENST00000471298 MSH5O43196 834 aa8.19□□□□□ -1.1
CEACAM1-210ENST00000471298 PIAS4Q8N2W9 510 aaPredicted RBP7.77□□□□□ -1.17
CEACAM1-210ENST00000471298 PLPPR3Q6T4P5 718 aa7.56□□□□□ -1.2
CEACAM1-210ENST00000471298 PPP6R1Q9UPN7 881 aa7.46□□□□□ -1.22
CEACAM1-210ENST00000471298 ADRA2BP18089 450 aa7.4□□□□□ -1.22
CEACAM1-210ENST00000471298 CACNB1Q02641 598 aaPredicted RBP7.21□□□□□ -1.26
CEACAM1-210ENST00000471298 DMRT2Q9Y5R5 561 aa7.11□□□□□ -1.27
CEACAM1-210ENST00000471298 SCAF1Q9H7N4 1312 aaKnown RBP6.97□□□□□ -1.29
CEACAM1-210ENST00000471298 MAPK8IP2Q13387 824 aaPredicted RBP6.91□□□□□ -1.3
CEACAM1-210ENST00000471298 RNF39Q9H2S5 420 aa6.89□□□□□ -1.31
CEACAM1-210ENST00000471298 C1QBPQ07021 282 aaKnown RBP6.82□□□□□ -1.32
CEACAM1-210ENST00000471298 POTEHQ6S545 545 aa6.72□□□□□ -1.33
CEACAM1-210ENST00000471298 DCAF8L1A6NGE4 600 aa6.71□□□□□ -1.34
CEACAM1-210ENST00000471298 DNAJC5BQ9UF47 199 aa6.7□□□□□ -1.34
CEACAM1-210ENST00000471298 HOXD11P31277 338 aaPredicted RBP6.69□□□□□ -1.34
CEACAM1-210ENST00000471298 PPP4R3CPQ6ZMV5 832 aa6.68□□□□□ -1.34
CEACAM1-210ENST00000471298 RNF216Q9NWF9 866 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-210ENST00000471298 CNKSR2Q8WXI2 1034 aa6.49□□□□□ -1.37
CEACAM1-210ENST00000471298 KCNA4P22459 653 aa6.48□□□□□ -1.37
CEACAM1-210ENST00000471298 NCBP3Q53F19 620 aaKnown RBP6.48□□□□□ -1.37
CEACAM1-210ENST00000471298 NPM3O75607 178 aaKnown RBP6.39□□□□□ -1.39
CEACAM1-210ENST00000471298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.3□□□□□ -1.43e-9■■□□□ 13.2
CEACAM1-210ENST00000471298 DSG3P32926 999 aa6.27□□□□□ -1.41
CEACAM1-210ENST00000471298 SLC4A1APQ9BWU0 796 aaKnown RBP6.16□□□□□ -1.42
CEACAM1-210ENST00000471298 CAPN15O75808 1086 aa6.15□□□□□ -1.42
CEACAM1-210ENST00000471298 RBM42Q9BTD8 480 aaKnown RBP6.11□□□□□ -1.43
CEACAM1-210ENST00000471298 SPINK5Q9NQ38 1064 aaPredicted RBP6.11□□□□□ -1.43
CEACAM1-210ENST00000471298 U3KPZ7 1027 aaPredicted RBP6.11□□□□□ -1.43
CEACAM1-210ENST00000471298 SP7Q8TDD2 431 aaPredicted RBP6.09□□□□□ -1.43
CEACAM1-210ENST00000471298 APLP2Q06481 763 aa6.07□□□□□ -1.44
CEACAM1-210ENST00000471298 SLC4A2P04920 1241 aa6.05□□□□□ -1.44
CEACAM1-210ENST00000471298 CHRDL2Q6WN34 429 aa6.05□□□□□ -1.44
CEACAM1-210ENST00000471298 ZNF219Q9P2Y4 722 aaPredicted RBP6.04□□□□□ -1.44
CEACAM1-210ENST00000471298 SLC24A1O60721 1099 aa6□□□□□ -1.45
CEACAM1-210ENST00000471298 ZBTB22O15209 634 aa5.96□□□□□ -1.46
CEACAM1-210ENST00000471298 FOXD4L1Q9NU39 408 aa5.96□□□□□ -1.46
CEACAM1-210ENST00000471298 EHMT2Q96KQ7 1210 aa5.95□□□□□ -1.46
CEACAM1-210ENST00000471298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.92□□□□□ -1.46
CEACAM1-210ENST00000471298 HNRNPUL2Q1KMD3 747 aaKnown RBP5.92□□□□□ -1.46
CEACAM1-210ENST00000471298 CSRNP3Q8WYN3 585 aa5.92□□□□□ -1.46
CEACAM1-210ENST00000471298 TRHP20396 242 aaPredicted RBP5.91□□□□□ -1.46
CEACAM1-210ENST00000471298 ABCB7O75027 752 aa5.9□□□□□ -1.46
CEACAM1-210ENST00000471298 MYCNP04198 464 aaPredicted RBP5.89□□□□□ -1.47
CEACAM1-210ENST00000471298 SAMD1Q6SPF0 538 aaPredicted RBP5.83□□□□□ -1.48
CEACAM1-210ENST00000471298 AKT1S1Q96B36 256 aa5.83□□□□□ -1.48
CEACAM1-210ENST00000471298 HAX1O00165 279 aa5.79□□□□□ -1.48
CEACAM1-210ENST00000471298 PIP4P2Q8N4L2 257 aa5.78□□□□□ -1.48
CEACAM1-210ENST00000471298 ATF5Q9Y2D1 282 aaPredicted RBP5.77□□□□□ -1.49
CEACAM1-210ENST00000471298 ATXN8OSP0DMR3 200 aa5.76□□□□□ -1.49
CEACAM1-210ENST00000471298 FXR2P51116 673 aaKnown RBP eCLIP5.73□□□□□ -1.49
CEACAM1-210ENST00000471298 REM2Q8IYK8 340 aaPredicted RBP5.7□□□□□ -1.5
CEACAM1-210ENST00000471298 LHX8Q68G74 356 aa5.69□□□□□ -1.5
CEACAM1-210ENST00000471298 ZBTB12Q9Y330 459 aaPredicted RBP5.69□□□□□ -1.5
CEACAM1-210ENST00000471298 POLA2Q14181 598 aa5.68□□□□□ -1.5
CEACAM1-210ENST00000471298 PLSCR2Q9NRY7 297 aa5.63□□□□□ -1.51
CEACAM1-210ENST00000471298 PITPNM1O00562 1244 aa5.62□□□□□ -1.51
CEACAM1-210ENST00000471298 EVX2Q03828 476 aa5.61□□□□□ -1.51
CEACAM1-210ENST00000471298 C19orf67A6NJJ6 358 aa5.56□□□□□ -1.52
CEACAM1-210ENST00000471298 RTN4Q9NQC3 1192 aaKnown RBP5.56□□□□□ -1.52
CEACAM1-210ENST00000471298 GABBR2O75899 941 aa5.54□□□□□ -1.52
CEACAM1-210ENST00000471298 CLCN6P51797 869 aa5.52□□□□□ -1.53
CEACAM1-210ENST00000471298 FBLN2P98095 1184 aa5.5□□□□□ -1.53
CEACAM1-210ENST00000471298 MKRN4PQ13434 485 aaPredicted RBP5.5□□□□□ -1.53
CEACAM1-210ENST00000471298 OSCARQ8IYS5 282 aa5.5□□□□□ -1.53
CEACAM1-210ENST00000471298 AMER1Q5JTC6 1135 aaPredicted RBP5.48□□□□□ -1.53
CEACAM1-210ENST00000471298 PRKAR2AP13861 404 aaKnown RBP5.47□□□□□ -1.53
CEACAM1-210ENST00000471298 PCDH10Q9P2E7 1040 aa5.47□□□□□ -1.53
CEACAM1-210ENST00000471298 SPDYE2BA6NHP3 402 aa5.43□□□□□ -1.54
CEACAM1-210ENST00000471298 SPDYE6P0CI01 402 aa5.43□□□□□ -1.54
CEACAM1-210ENST00000471298 SPDYE2Q495Y8 402 aa5.43□□□□□ -1.54
CEACAM1-210ENST00000471298 SPDYE1Q8NFV5 336 aaPredicted RBP5.43□□□□□ -1.54
CEACAM1-210ENST00000471298 POTEIP0CG38 1075 aa5.38□□□□□ -1.55
CEACAM1-210ENST00000471298 POTEMA6NI47 508 aa5.37□□□□□ -1.55
CEACAM1-210ENST00000471298 ZNF692Q9BU19 519 aaPredicted RBP5.37□□□□□ -1.55
CEACAM1-210ENST00000471298 SPDYE4A6NLX3 237 aa5.36□□□□□ -1.55
CEACAM1-210ENST00000471298 SSUH2Q9Y2M2 353 aa5.34□□□□□ -1.55
CEACAM1-210ENST00000471298 FKBP8Q14318 412 aa5.33□□□□□ -1.56
CEACAM1-210ENST00000471298 POTEGQ6S5H5 508 aa5.33□□□□□ -1.56
CEACAM1-210ENST00000471298 CLEC11AQ9Y240 323 aa5.33□□□□□ -1.56
CEACAM1-210ENST00000471298 DCBLD2Q96PD2 775 aa5.32□□□□□ -1.56
CEACAM1-210ENST00000471298 PABPN1Q86U42 306 aaKnown RBP eCLIP5.3□□□□□ -1.56
CEACAM1-210ENST00000471298 OTUD5Q96G74 571 aa5.3□□□□□ -1.56
CEACAM1-210ENST00000471298 CD44P16070 742 aaKnown RBP5.28□□□□□ -1.56
CEACAM1-210ENST00000471298 PROM2Q8N271 834 aa5.25□□□□□ -1.57
CEACAM1-210ENST00000471298 ZNF579Q8NAF0 562 aaKnown RBP5.25□□□□□ -1.57
CEACAM1-210ENST00000471298 DAXXQ9UER7 740 aaPredicted RBP5.25□□□□□ -1.57
CEACAM1-210ENST00000471298 PRR29P0C7W0 189 aa5.24□□□□□ -1.57
CEACAM1-210ENST00000471298 PRKCSHP14314 528 aaPredicted RBP5.24□□□□□ -1.57
CEACAM1-210ENST00000471298 CHADLQ6NUI6 762 aa5.24□□□□□ -1.57
CEACAM1-210ENST00000471298 FARP1Q9Y4F1 1045 aaPredicted RBP5.21□□□□□ -1.58
CEACAM1-210ENST00000471298 STAG3Q9UJ98 1225 aa5.2□□□□□ -1.58
CEACAM1-210ENST00000471298 MAMSTRQ6ZN01 415 aa5.18□□□□□ -1.58
CEACAM1-210ENST00000471298 POTEB2H3BUK9 544 aa5.17□□□□□ -1.58
CEACAM1-210ENST00000471298 FBXO3Q9UK99 471 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms