RNA–Protein interactions for RNA: ENST00000460715.2

TROVE2-209, Transcript of TROVE domain family member 2, humanhuman

TSL 3

Gene TROVE2, Length 1,474 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-209ENST00000460715 NISCHQ9Y2I1 1504 aa34.55■■■■□ 3.12
TROVE2-209ENST00000460715 CCDC180Q9P1Z9 1646 aa30.26■■■□□ 2.44
TROVE2-209ENST00000460715 AEBP2Q6ZN18 517 aaPredicted RBP29.37■■■□□ 2.29
TROVE2-209ENST00000460715 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
TROVE2-209ENST00000460715 DCAF1Q9Y4B6 1507 aa28.65■■■□□ 2.18
TROVE2-209ENST00000460715 ABCC9O60706 1549 aa28.53■■■□□ 2.16
TROVE2-209ENST00000460715 DCAF8L2P0C7V8 631 aa28.38■■■□□ 2.13
TROVE2-209ENST00000460715 MYO15BQ96JP2 1530 aa28.36■■■□□ 2.13
TROVE2-209ENST00000460715 NACADO15069 1562 aa28.17■■■□□ 2.1
TROVE2-209ENST00000460715 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
TROVE2-209ENST00000460715 RB1CC1Q8TDY2 1594 aa27.93■■■□□ 2.06
TROVE2-209ENST00000460715 SCRIBQ14160 1630 aa27.71■■■□□ 2.03
TROVE2-209ENST00000460715 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
TROVE2-209ENST00000460715 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
TROVE2-209ENST00000460715 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
TROVE2-209ENST00000460715 SUPT5HO00267 1087 aaKnown RBP26.87■■□□□ 1.89
TROVE2-209ENST00000460715 PABPN1Q86U42 306 aaKnown RBP eCLIP26.82■■□□□ 1.88
TROVE2-209ENST00000460715 CECR2Q9BXF3 1484 aa26.79■■□□□ 1.88
TROVE2-209ENST00000460715 RSF1Q96T23 1441 aaPredicted RBP26.74■■□□□ 1.87
TROVE2-209ENST00000460715 BAZ1AQ9NRL2 1556 aaPredicted RBP26.72■■□□□ 1.87
TROVE2-209ENST00000460715 MROH2BQ7Z745 1585 aa26.65■■□□□ 1.86
TROVE2-209ENST00000460715 SMARCA4P51532 1647 aa26.6■■□□□ 1.85
TROVE2-209ENST00000460715 WIZO95785 1651 aa26.43■■□□□ 1.82
TROVE2-209ENST00000460715 PEG3Q9GZU2 1588 aa26.31■■□□□ 1.8
TROVE2-209ENST00000460715 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
TROVE2-209ENST00000460715 TOP2AP11388 1531 aaKnown RBP26.23■■□□□ 1.79
TROVE2-209ENST00000460715 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
TROVE2-209ENST00000460715 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
TROVE2-209ENST00000460715 BAZ1BQ9UIG0 1483 aaKnown RBP26.02■■□□□ 1.76
TROVE2-209ENST00000460715 HMGXB3Q12766 1538 aa25.97■■□□□ 1.75
TROVE2-209ENST00000460715 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
TROVE2-209ENST00000460715 CCDC88BA6NC98 1476 aa25.88■■□□□ 1.73
TROVE2-209ENST00000460715 CC2D2AQ9P2K1 1620 aa25.87■■□□□ 1.73
TROVE2-209ENST00000460715 DNAJC5BQ9UF47 199 aa25.79■■□□□ 1.72
TROVE2-209ENST00000460715 CFTRP13569 1480 aa25.35■■□□□ 1.65
TROVE2-209ENST00000460715 SENP3Q9H4L4 574 aaPredicted RBP25.34■■□□□ 1.65
TROVE2-209ENST00000460715 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
TROVE2-209ENST00000460715 PRDM2Q13029 1718 aa25.31■■□□□ 1.64
TROVE2-209ENST00000460715 ABCC8Q09428 1581 aa25.29■■□□□ 1.64
TROVE2-209ENST00000460715 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
TROVE2-209ENST00000460715 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.624e-8■■■■■ 27.9
TROVE2-209ENST00000460715 LAMC3Q9Y6N6 1575 aa25.12■■□□□ 1.61
TROVE2-209ENST00000460715 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
TROVE2-209ENST00000460715 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
TROVE2-209ENST00000460715 BIVM-ERCC5R4GMW8 1640 aa25.03■■□□□ 1.6
TROVE2-209ENST00000460715 NESP48681 1621 aa25.01■■□□□ 1.59
TROVE2-209ENST00000460715 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
TROVE2-209ENST00000460715 CUX1P39880 1505 aa24.95■■□□□ 1.58
TROVE2-209ENST00000460715 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
TROVE2-209ENST00000460715 CEP164Q9UPV0 1460 aa24.87■■□□□ 1.57
TROVE2-209ENST00000460715 EEA1Q15075 1411 aa24.86■■□□□ 1.57
TROVE2-209ENST00000460715 PHF23Q9BUL5 403 aaPredicted RBP24.83■■□□□ 1.57
TROVE2-209ENST00000460715 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
TROVE2-209ENST00000460715 FAM9AQ8IZU1 332 aaPredicted RBP24.78■■□□□ 1.56
TROVE2-209ENST00000460715 SOGA1O94964 1423 aa24.78■■□□□ 1.56
TROVE2-209ENST00000460715 KIF21AQ7Z4S6 1674 aa24.77■■□□□ 1.56
TROVE2-209ENST00000460715 TOPBP1Q92547 1522 aa24.72■■□□□ 1.55
TROVE2-209ENST00000460715 FGD5Q6ZNL6 1462 aa24.69■■□□□ 1.54
TROVE2-209ENST00000460715 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
TROVE2-209ENST00000460715 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
TROVE2-209ENST00000460715 LOC105371045A0A1W2PR82 267 aa24.66■■□□□ 1.54
TROVE2-209ENST00000460715 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
TROVE2-209ENST00000460715 MRC2Q9UBG0 1479 aa24.6■■□□□ 1.53
TROVE2-209ENST00000460715 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
TROVE2-209ENST00000460715 KIF27Q86VH2 1401 aa24.57■■□□□ 1.52
TROVE2-209ENST00000460715 KIF21BO75037 1637 aa24.52■■□□□ 1.52
TROVE2-209ENST00000460715 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
TROVE2-209ENST00000460715 CUX2O14529 1486 aa24.51■■□□□ 1.51
TROVE2-209ENST00000460715 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
TROVE2-209ENST00000460715 WDR62O43379 1518 aa24.49■■□□□ 1.51
TROVE2-209ENST00000460715 GOLGA3Q08378 1498 aa24.47■■□□□ 1.51
TROVE2-209ENST00000460715 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
TROVE2-209ENST00000460715 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
TROVE2-209ENST00000460715 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
TROVE2-209ENST00000460715 PRXQ9BXM0 1461 aa24.39■■□□□ 1.49
TROVE2-209ENST00000460715 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
TROVE2-209ENST00000460715 EHMT2Q96KQ7 1210 aa24.38■■□□□ 1.49
TROVE2-209ENST00000460715 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
TROVE2-209ENST00000460715 TARBP1Q13395 1621 aaKnown RBP24.37■■□□□ 1.49
TROVE2-209ENST00000460715 TNIKQ9UKE5 1360 aa24.35■■□□□ 1.49
TROVE2-209ENST00000460715 ABCA5Q8WWZ7 1642 aa24.33■■□□□ 1.49
TROVE2-209ENST00000460715 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
TROVE2-209ENST00000460715 IGF1RP08069 1367 aa24.31■■□□□ 1.48
TROVE2-209ENST00000460715 IFT140Q96RY7 1462 aa24.29■■□□□ 1.48
TROVE2-209ENST00000460715 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
TROVE2-209ENST00000460715 CUL7Q14999 1698 aa24.25■■□□□ 1.47
TROVE2-209ENST00000460715 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
TROVE2-209ENST00000460715 CARMIL1Q5VZK9 1371 aa24.21■■□□□ 1.47
TROVE2-209ENST00000460715 TDRD9Q8NDG6 1382 aaKnown RBP24.21■■□□□ 1.47
TROVE2-209ENST00000460715 CEP162Q5TB80 1403 aa24.2■■□□□ 1.46
TROVE2-209ENST00000460715 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
TROVE2-209ENST00000460715 GRIN2BQ13224 1484 aa24.08■■□□□ 1.45
TROVE2-209ENST00000460715 ZNF608Q9ULD9 1512 aaPredicted RBP24.08■■□□□ 1.45
TROVE2-209ENST00000460715 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.442e-6■■■□□ 15.2
TROVE2-209ENST00000460715 EIF4G3O43432 1585 aaKnown RBP24.06■■□□□ 1.44
TROVE2-209ENST00000460715 CLIP1P30622 1438 aa24.04■■□□□ 1.44
TROVE2-209ENST00000460715 ADAMTS12P58397 1594 aa24.02■■□□□ 1.44
TROVE2-209ENST00000460715 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
TROVE2-209ENST00000460715 CTTNBP2Q8WZ74 1663 aa23.95■■□□□ 1.42
TROVE2-209ENST00000460715 MAGI1Q96QZ7 1491 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms