Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC104640.1-201ENST00000562617 2109 ntBASIC15.76■□□□□ 0.11
RETP07949 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
RETP07949 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RETP07949 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
RETP07949 C1QBPP1-201ENST00000400117 770 ntBASIC15.76■□□□□ 0.11
RETP07949 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.76■□□□□ 0.11
RETP07949 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.76■□□□□ 0.11
RETP07949 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.76■□□□□ 0.11
RETP07949 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.76■□□□□ 0.11
RETP07949 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.76■□□□□ 0.11
RETP07949 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.76■□□□□ 0.11
RETP07949 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.76■□□□□ 0.11
RETP07949 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.76■□□□□ 0.11
RETP07949 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.76■□□□□ 0.11
RETP07949 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RETP07949 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RETP07949 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.76■□□□□ 0.11
RETP07949 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.76■□□□□ 0.11
RETP07949 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RETP07949 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.75■□□□□ 0.11
RETP07949 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RETP07949 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 LINC00554-201ENST00000564841 3011 ntBASIC15.75■□□□□ 0.11
RETP07949 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.75■□□□□ 0.11
RETP07949 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.75■□□□□ 0.11
RETP07949 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.75■□□□□ 0.11
RETP07949 AL662890.1-201ENST00000396818 632 ntBASIC15.75■□□□□ 0.11
RETP07949 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RETP07949 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.75■□□□□ 0.11
RETP07949 Z93015.1-201ENST00000451718 390 ntBASIC15.75■□□□□ 0.11
RETP07949 MPRIPP1-201ENST00000452433 1089 ntBASIC15.75■□□□□ 0.11
RETP07949 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.75■□□□□ 0.11
RETP07949 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RETP07949 AC120045.2-201ENST00000567334 178 ntBASIC15.75■□□□□ 0.11
RETP07949 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.75■□□□□ 0.11
RETP07949 CLUHP6-201ENST00000580789 941 ntBASIC15.75■□□□□ 0.11
RETP07949 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RETP07949 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.75■□□□□ 0.11
RETP07949 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
RETP07949 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RETP07949 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.75■□□□□ 0.11
RETP07949 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RETP07949 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RETP07949 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.75■□□□□ 0.11
RETP07949 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RETP07949 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RETP07949 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RETP07949 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.74■□□□□ 0.11
RETP07949 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.74■□□□□ 0.11
RETP07949 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RETP07949 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RETP07949 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.74■□□□□ 0.11
RETP07949 GGT4P-201ENST00000623672 1708 ntBASIC15.74■□□□□ 0.11
RETP07949 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms