RNA–Protein interactions for RNA: ENST00000328090.9

FAM208B-201, Transcript of family with sequence similarity 208 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM208B, Length 8,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208B-201ENST00000328090 PELP1Q8IZL8 1130 aaKnown RBP27.33■■□□□ 1.97
FAM208B-201ENST00000328090 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
FAM208B-201ENST00000328090 CCER1Q8TC90 406 aaPredicted RBP26.04■■□□□ 1.76
FAM208B-201ENST00000328090 ERICH6Q7L0X2 663 aa26.01■■□□□ 1.75
FAM208B-201ENST00000328090 FAM9AQ8IZU1 332 aaPredicted RBP25.83■■□□□ 1.73
FAM208B-201ENST00000328090 APLP2Q06481 763 aa25.78■■□□□ 1.72
FAM208B-201ENST00000328090 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
FAM208B-201ENST00000328090 MYT1Q01538 1121 aa25.42■■□□□ 1.66
FAM208B-201ENST00000328090 CENPBP07199 599 aaPredicted RBP25.31■■□□□ 1.64
FAM208B-201ENST00000328090 EHMT2Q96KQ7 1210 aa25.23■■□□□ 1.63
FAM208B-201ENST00000328090 NEFLP07196 543 aa25.08■■□□□ 1.6
FAM208B-201ENST00000328090 YTHDC1Q96MU7 727 aaKnown RBP25.06■■□□□ 1.6
FAM208B-201ENST00000328090 DAXXQ9UER7 740 aaPredicted RBP24.88■■□□□ 1.57
FAM208B-201ENST00000328090 ZEB1P37275 1124 aaPredicted RBP24.78■■□□□ 1.56
FAM208B-201ENST00000328090 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
FAM208B-201ENST00000328090 PCGF6Q9BYE7 350 aa24.63■■□□□ 1.53
FAM208B-201ENST00000328090 TTBK1Q5TCY1 1321 aaPredicted RBP24.54■■□□□ 1.52
FAM208B-201ENST00000328090 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
FAM208B-201ENST00000328090 RANGAP1P46060 587 aaPredicted RBP24.2■■□□□ 1.47
FAM208B-201ENST00000328090 ZNF316A6NFI3 1004 aaPredicted RBP24.13■■□□□ 1.45
FAM208B-201ENST00000328090 RTL5Q5HYW3 569 aaPredicted RBP24.07■■□□□ 1.44
FAM208B-201ENST00000328090 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
FAM208B-201ENST00000328090 MYT1LQ9UL68 1186 aa23.9■■□□□ 1.42
FAM208B-201ENST00000328090 CLSPNQ9HAW4 1339 aa23.9■■□□□ 1.42
FAM208B-201ENST00000328090 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
FAM208B-201ENST00000328090 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
FAM208B-201ENST00000328090 POLR3GLQ9BT43 218 aa23.79■■□□□ 1.4
FAM208B-201ENST00000328090 SLC4A1APQ9BWU0 796 aaKnown RBP23.68■■□□□ 1.38
FAM208B-201ENST00000328090 ZBTB47Q9UFB7 747 aaPredicted RBP23.59■■□□□ 1.37
FAM208B-201ENST00000328090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.48■■□□□ 1.35
FAM208B-201ENST00000328090 HNRNPUL2Q1KMD3 747 aaKnown RBP23.48■■□□□ 1.35
FAM208B-201ENST00000328090 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
FAM208B-201ENST00000328090 CNGB1Q14028 1251 aaPredicted RBP23.32■■□□□ 1.32
FAM208B-201ENST00000328090 TRIM26Q12899 539 aaPredicted RBP23.27■■□□□ 1.32
FAM208B-201ENST00000328090 ITGAEP38570 1179 aa23.27■■□□□ 1.32
FAM208B-201ENST00000328090 ANP32BQ92688 251 aaKnown RBP23.2■■□□□ 1.3
FAM208B-201ENST00000328090 GLIPR1L2Q4G1C9 344 aa23.12■■□□□ 1.29
FAM208B-201ENST00000328090 CDK11AQ9UQ88 783 aaPredicted RBP23.09■■□□□ 1.29
FAM208B-201ENST00000328090 SLC24A1O60721 1099 aa23.08■■□□□ 1.29
FAM208B-201ENST00000328090 NEFMP07197 916 aa23.08■■□□□ 1.29
FAM208B-201ENST00000328090 HRCP23327 699 aa23.08■■□□□ 1.28
FAM208B-201ENST00000328090 CANXP27824 592 aaKnown RBP23.05■■□□□ 1.28
FAM208B-201ENST00000328090 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
FAM208B-201ENST00000328090 ANP32AP39687 249 aaKnown RBP22.9■■□□□ 1.26
FAM208B-201ENST00000328090 DIEXFQ68CQ4 756 aaKnown RBP22.85■■□□□ 1.25
FAM208B-201ENST00000328090 HSP90AA1P07900 732 aaKnown RBP22.84■■□□□ 1.25
FAM208B-201ENST00000328090 BCL11AQ9H165 835 aa22.82■■□□□ 1.24
FAM208B-201ENST00000328090 CDK11BP21127 795 aaKnown RBP22.82■■□□□ 1.24
FAM208B-201ENST00000328090 EIF5BO60841 1220 aaKnown RBP22.8■■□□□ 1.24
FAM208B-201ENST00000328090 ANP32CO43423 234 aa22.79■■□□□ 1.24
FAM208B-201ENST00000328090 UPF2Q9HAU5 1272 aaKnown RBP22.71■■□□□ 1.23
FAM208B-201ENST00000328090 TRIM52Q96A61 297 aa22.71■■□□□ 1.23
FAM208B-201ENST00000328090 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
FAM208B-201ENST00000328090 BCANQ96GW7 911 aa22.64■■□□□ 1.22
FAM208B-201ENST00000328090 ZNF326Q5BKZ1 582 aaKnown RBP22.53■■□□□ 1.2
FAM208B-201ENST00000328090 NEUROD1Q13562 356 aa22.49■■□□□ 1.19
FAM208B-201ENST00000328090 NPM2Q86SE8 214 aaKnown RBP22.43■■□□□ 1.18
FAM208B-201ENST00000328090 TNNT2P45379 298 aaPredicted RBP22.39■■□□□ 1.17
FAM208B-201ENST00000328090 GTF3C3Q9Y5Q9 886 aa22.37■■□□□ 1.17
FAM208B-201ENST00000328090 ESF1Q9H501 851 aaKnown RBP22.28■■□□□ 1.16
FAM208B-201ENST00000328090 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.23■■□□□ 1.15
FAM208B-201ENST00000328090 ANP32EQ9BTT0 268 aa22.15■■□□□ 1.14
FAM208B-201ENST00000328090 MYH16Q9H6N6 1097 aa22.15■■□□□ 1.14
FAM208B-201ENST00000328090 TRIM44Q96DX7 344 aaPredicted RBP22.14■■□□□ 1.13
FAM208B-201ENST00000328090 NCLP19338 710 aaKnown RBP22.14■■□□□ 1.13
FAM208B-201ENST00000328090 ZRSR1Q15695 479 aaKnown RBP22.12■■□□□ 1.13
FAM208B-201ENST00000328090 STAG3Q9UJ98 1225 aa22.09■■□□□ 1.13
FAM208B-201ENST00000328090 LOC105371045A0A1W2PR82 267 aa22.08■■□□□ 1.12
FAM208B-201ENST00000328090 ARXQ96QS3 562 aa22.04■■□□□ 1.12
FAM208B-201ENST00000328090 GOLGA6L22H0YM25 854 aa22.03■■□□□ 1.12
FAM208B-201ENST00000328090 BECN1Q14457 450 aa21.98■■□□□ 1.11
FAM208B-201ENST00000328090 NBR1Q14596 966 aa21.96■■□□□ 1.11
FAM208B-201ENST00000328090 FBLN2P98095 1184 aa21.95■■□□□ 1.1
FAM208B-201ENST00000328090 CCDC136Q96JN2 1154 aa21.92■■□□□ 1.1
FAM208B-201ENST00000328090 DNTTIP2Q5QJE6 756 aaKnown RBP21.89■■□□□ 1.1
FAM208B-201ENST00000328090 PTMAP06454 111 aaKnown RBP21.88■■□□□ 1.09
FAM208B-201ENST00000328090 GOLGA6L6A8MZA4 724 aa21.87■■□□□ 1.09
FAM208B-201ENST00000328090 DDRGK1Q96HY6 314 aa21.87■■□□□ 1.09
FAM208B-201ENST00000328090 FKBP8Q14318 412 aa21.87■■□□□ 1.09
FAM208B-201ENST00000328090 WDR43Q15061 677 aaKnown RBP eCLIP21.87■■□□□ 1.09
FAM208B-201ENST00000328090 CASC1Q6TDU7 716 aa21.84■■□□□ 1.09
FAM208B-201ENST00000328090 A0A0G2JS52 829 aa21.83■■□□□ 1.08
FAM208B-201ENST00000328090 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
FAM208B-201ENST00000328090 TONSLQ96HA7 1378 aa21.81■■□□□ 1.08
FAM208B-201ENST00000328090 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
FAM208B-201ENST00000328090 HNRNPUQ00839 825 aaKnown RBP eCLIP21.81■■□□□ 1.08
FAM208B-201ENST00000328090 NRDCO43847 1150 aa21.81■■□□□ 1.08
FAM208B-201ENST00000328090 TMC1Q8TDI8 760 aa21.81■■□□□ 1.08
FAM208B-201ENST00000328090 CHGAP10645 457 aaKnown RBP21.79■■□□□ 1.08
FAM208B-201ENST00000328090 TULP1O00294 542 aaPredicted RBP21.76■■□□□ 1.07
FAM208B-201ENST00000328090 ZNF777Q9ULD5 760 aaPredicted RBP21.74■■□□□ 1.07
FAM208B-201ENST00000328090 L1TD1Q5T7N2 865 aaKnown RBP21.73■■□□□ 1.07
FAM208B-201ENST00000328090 FAM9BQ8IZU0 186 aa21.71■■□□□ 1.07
FAM208B-201ENST00000328090 ERICH6BQ5W0A0 696 aa21.7■■□□□ 1.06
FAM208B-201ENST00000328090 CHAF1AQ13111 956 aaPredicted RBP21.65■■□□□ 1.06
FAM208B-201ENST00000328090 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
FAM208B-201ENST00000328090 SALL2Q9Y467 1007 aaPredicted RBP21.64■■□□□ 1.05
FAM208B-201ENST00000328090 NPM1P06748 294 aaKnown RBP eCLIP21.61■■□□□ 1.05
FAM208B-201ENST00000328090 NAP1L5Q96NT1 182 aaPredicted RBP21.54■■□□□ 1.04
FAM208B-201ENST00000328090 NCBP3Q53F19 620 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms