Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RAB5BP61020 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB5BP61020 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB5BP61020 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RAB5BP61020 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.45
RAB5BP61020 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RAB5BP61020 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RAB5BP61020 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RAB5BP61020 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RAB5BP61020 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RAB5BP61020 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 AL353732.1-201ENST00000569618 1459 ntBASIC12.27□□□□□ -0.45
RAB5BP61020 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RAB5BP61020 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5BP61020 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
RAB5BP61020 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RAB5BP61020 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB5BP61020 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
RAB5BP61020 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB5BP61020 AL512652.2-201ENST00000625156 1716 ntBASIC12.26□□□□□ -0.45
RAB5BP61020 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB5BP61020 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB5BP61020 MTHFR-210ENST00000641407 2387 ntBASIC12.26□□□□□ -0.45
RAB5BP61020 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RAB5BP61020 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB5BP61020 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 TSPY6P-201ENST00000448518 926 ntBASIC12.26□□□□□ -0.45
RAB5BP61020 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.26□□□□□ -0.45
RAB5BP61020 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.26□□□□□ -0.45
RAB5BP61020 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.26□□□□□ -0.45
RAB5BP61020 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 SLC25A1P4-201ENST00000567977 778 ntBASIC12.26□□□□□ -0.45
RAB5BP61020 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 AC009154.2-201ENST00000621177 724 ntBASIC12.26□□□□□ -0.45
RAB5BP61020 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB5BP61020 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RAB5BP61020 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RAB5BP61020 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 PTPRVP-205ENST00000641549 5067 ntBASIC12.25□□□□□ -0.45
RAB5BP61020 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB5BP61020 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB5BP61020 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB5BP61020 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms