RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 NISCHQ9Y2I1 1504 aa28.88■■■□□ 2.21
CNKSR3-204ENST00000479339 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
CNKSR3-204ENST00000479339 ABCC9O60706 1549 aa25.46■■□□□ 1.67
CNKSR3-204ENST00000479339 RB1CC1Q8TDY2 1594 aa24.4■■□□□ 1.5
CNKSR3-204ENST00000479339 NACADO15069 1562 aa24.33■■□□□ 1.49
CNKSR3-204ENST00000479339 DCAF8L2P0C7V8 631 aa24.17■■□□□ 1.46
CNKSR3-204ENST00000479339 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
CNKSR3-204ENST00000479339 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
CNKSR3-204ENST00000479339 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
CNKSR3-204ENST00000479339 UNC13AQ9UPW8 1703 aa23.79■■□□□ 1.4
CNKSR3-204ENST00000479339 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
CNKSR3-204ENST00000479339 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
CNKSR3-204ENST00000479339 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.37
CNKSR3-204ENST00000479339 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
CNKSR3-204ENST00000479339 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
CNKSR3-204ENST00000479339 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
CNKSR3-204ENST00000479339 CC2D2AQ9P2K1 1620 aa23.02■■□□□ 1.28
CNKSR3-204ENST00000479339 CECR2Q9BXF3 1484 aa22.93■■□□□ 1.26
CNKSR3-204ENST00000479339 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
CNKSR3-204ENST00000479339 SMARCA4P51532 1647 aa22.45■■□□□ 1.18
CNKSR3-204ENST00000479339 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
CNKSR3-204ENST00000479339 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
CNKSR3-204ENST00000479339 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
CNKSR3-204ENST00000479339 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
CNKSR3-204ENST00000479339 PEG3Q9GZU2 1588 aa22.27■■□□□ 1.16
CNKSR3-204ENST00000479339 PELP1Q8IZL8 1130 aaKnown RBP22.26■■□□□ 1.15
CNKSR3-204ENST00000479339 MROH2BQ7Z745 1585 aa22.24■■□□□ 1.15
CNKSR3-204ENST00000479339 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
CNKSR3-204ENST00000479339 HRCP23327 699 aa22.11■■□□□ 1.13
CNKSR3-204ENST00000479339 ERCC6Q03468 1493 aa21.97■■□□□ 1.11
CNKSR3-204ENST00000479339 WIZO95785 1651 aa21.96■■□□□ 1.11
CNKSR3-204ENST00000479339 NESP48681 1621 aa21.96■■□□□ 1.11
CNKSR3-204ENST00000479339 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
CNKSR3-204ENST00000479339 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.09
CNKSR3-204ENST00000479339 CUX2O14529 1486 aa21.88■■□□□ 1.09
CNKSR3-204ENST00000479339 CADPSQ9ULU8 1353 aa21.78■■□□□ 1.08
CNKSR3-204ENST00000479339 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
CNKSR3-204ENST00000479339 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
CNKSR3-204ENST00000479339 THOC2Q8NI27 1593 aaKnown RBP21.7■■□□□ 1.06
CNKSR3-204ENST00000479339 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
CNKSR3-204ENST00000479339 MYT1Q01538 1121 aa21.65■■□□□ 1.06
CNKSR3-204ENST00000479339 CFTRP13569 1480 aa21.6■■□□□ 1.05
CNKSR3-204ENST00000479339 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
CNKSR3-204ENST00000479339 DNAJC5Q9H3Z4 198 aa21.52■■□□□ 1.04
CNKSR3-204ENST00000479339 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.04
CNKSR3-204ENST00000479339 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
CNKSR3-204ENST00000479339 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
CNKSR3-204ENST00000479339 WDR62O43379 1518 aa21.49■■□□□ 1.03
CNKSR3-204ENST00000479339 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
CNKSR3-204ENST00000479339 URB2Q14146 1524 aaKnown RBP21.32■■□□□ 1
CNKSR3-204ENST00000479339 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
CNKSR3-204ENST00000479339 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
CNKSR3-204ENST00000479339 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
CNKSR3-204ENST00000479339 TOPBP1Q92547 1522 aa21.15■□□□□ 0.98
CNKSR3-204ENST00000479339 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
CNKSR3-204ENST00000479339 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
CNKSR3-204ENST00000479339 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
CNKSR3-204ENST00000479339 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
CNKSR3-204ENST00000479339 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
CNKSR3-204ENST00000479339 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
CNKSR3-204ENST00000479339 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
CNKSR3-204ENST00000479339 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
CNKSR3-204ENST00000479339 CUX1P39880 1505 aa20.89■□□□□ 0.93
CNKSR3-204ENST00000479339 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
CNKSR3-204ENST00000479339 SOGA1O94964 1423 aa20.86■□□□□ 0.93
CNKSR3-204ENST00000479339 ZEB1P37275 1124 aaPredicted RBP20.86■□□□□ 0.93
CNKSR3-204ENST00000479339 FGD5Q6ZNL6 1462 aa20.85■□□□□ 0.93
CNKSR3-204ENST00000479339 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
CNKSR3-204ENST00000479339 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.934e-8■■■■■ 31.9
CNKSR3-204ENST00000479339 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
CNKSR3-204ENST00000479339 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
CNKSR3-204ENST00000479339 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
CNKSR3-204ENST00000479339 TRIM26Q12899 539 aaPredicted RBP20.7■□□□□ 0.9
CNKSR3-204ENST00000479339 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
CNKSR3-204ENST00000479339 GRIN2BQ13224 1484 aa20.65■□□□□ 0.9
CNKSR3-204ENST00000479339 CHD1O14646 1710 aa20.65■□□□□ 0.9
CNKSR3-204ENST00000479339 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
CNKSR3-204ENST00000479339 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
CNKSR3-204ENST00000479339 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
CNKSR3-204ENST00000479339 MAGI1Q96QZ7 1491 aaPredicted RBP20.63■□□□□ 0.89
CNKSR3-204ENST00000479339 TOP2BQ02880 1626 aa20.63■□□□□ 0.89
CNKSR3-204ENST00000479339 BIVM-ERCC5R4GMW8 1640 aa20.63■□□□□ 0.89
CNKSR3-204ENST00000479339 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
CNKSR3-204ENST00000479339 FBLN2P98095 1184 aa20.61■□□□□ 0.89
CNKSR3-204ENST00000479339 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
CNKSR3-204ENST00000479339 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.89
CNKSR3-204ENST00000479339 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.89
CNKSR3-204ENST00000479339 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.89
CNKSR3-204ENST00000479339 ABCA5Q8WWZ7 1642 aa20.58■□□□□ 0.88
CNKSR3-204ENST00000479339 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
CNKSR3-204ENST00000479339 SYNJ2O15056 1496 aa20.55■□□□□ 0.88
CNKSR3-204ENST00000479339 PBRM1Q86U86 1689 aa20.55■□□□□ 0.88
CNKSR3-204ENST00000479339 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
CNKSR3-204ENST00000479339 TTBK1Q5TCY1 1321 aaPredicted RBP20.51■□□□□ 0.87
CNKSR3-204ENST00000479339 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
CNKSR3-204ENST00000479339 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
CNKSR3-204ENST00000479339 ERICH3Q5RHP9 1530 aa20.4■□□□□ 0.86
CNKSR3-204ENST00000479339 ADAMTS12P58397 1594 aa20.4■□□□□ 0.86
CNKSR3-204ENST00000479339 ARAP1Q96P48 1450 aa20.39■□□□□ 0.85
CNKSR3-204ENST00000479339 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms