RNA–Protein interactions for RNA: ENST00000380641.4

CNTLN-201, Transcript of centlein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CNTLN, Length 4,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTLN-201ENST00000380641 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
CNTLN-201ENST00000380641 DCAF8L2P0C7V8 631 aa24.3■■□□□ 1.48
CNTLN-201ENST00000380641 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
CNTLN-201ENST00000380641 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
CNTLN-201ENST00000380641 EHMT2Q96KQ7 1210 aa22.3■■□□□ 1.16
CNTLN-201ENST00000380641 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
CNTLN-201ENST00000380641 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
CNTLN-201ENST00000380641 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
CNTLN-201ENST00000380641 TTBK1Q5TCY1 1321 aaPredicted RBP21.51■■□□□ 1.03
CNTLN-201ENST00000380641 APLP2Q06481 763 aa21.45■■□□□ 1.02
CNTLN-201ENST00000380641 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
CNTLN-201ENST00000380641 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
CNTLN-201ENST00000380641 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
CNTLN-201ENST00000380641 PPARGC1BQ86YN6 1023 aaKnown RBP21■□□□□ 0.95
CNTLN-201ENST00000380641 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
CNTLN-201ENST00000380641 CCER1Q8TC90 406 aaPredicted RBP20.98■□□□□ 0.95
CNTLN-201ENST00000380641 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.94
CNTLN-201ENST00000380641 ZEB1P37275 1124 aaPredicted RBP20.88■□□□□ 0.93
CNTLN-201ENST00000380641 ABCC9O60706 1549 aa20.85■□□□□ 0.93
CNTLN-201ENST00000380641 TRIM26Q12899 539 aaPredicted RBP20.76■□□□□ 0.91
CNTLN-201ENST00000380641 PABPN1Q86U42 306 aaKnown RBP eCLIP20.64■□□□□ 0.89
CNTLN-201ENST00000380641 HRCP23327 699 aa20.61■□□□□ 0.89
CNTLN-201ENST00000380641 PELP1Q8IZL8 1130 aaKnown RBP20.59■□□□□ 0.89
CNTLN-201ENST00000380641 CENPBP07199 599 aaPredicted RBP20.5■□□□□ 0.87
CNTLN-201ENST00000380641 ITGAEP38570 1179 aa20.4■□□□□ 0.86
CNTLN-201ENST00000380641 HNRNPUL2Q1KMD3 747 aaKnown RBP20.38■□□□□ 0.85
CNTLN-201ENST00000380641 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
CNTLN-201ENST00000380641 YTHDC1Q96MU7 727 aaKnown RBP20.37■□□□□ 0.85
CNTLN-201ENST00000380641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.25■□□□□ 0.83
CNTLN-201ENST00000380641 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
CNTLN-201ENST00000380641 CCDC180Q9P1Z9 1646 aa20.07■□□□□ 0.8
CNTLN-201ENST00000380641 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
CNTLN-201ENST00000380641 NEFLP07196 543 aa19.93■□□□□ 0.78
CNTLN-201ENST00000380641 FAM50AQ14320 339 aaKnown RBP19.9■□□□□ 0.78
CNTLN-201ENST00000380641 DIEXFQ68CQ4 756 aaKnown RBP19.87■□□□□ 0.77
CNTLN-201ENST00000380641 POLR3GLQ9BT43 218 aa19.86■□□□□ 0.77
CNTLN-201ENST00000380641 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
CNTLN-201ENST00000380641 CNGB1Q14028 1251 aaPredicted RBP19.78■□□□□ 0.76
CNTLN-201ENST00000380641 ERICH6Q7L0X2 663 aa19.75■□□□□ 0.75
CNTLN-201ENST00000380641 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
CNTLN-201ENST00000380641 NEUROD1Q13562 356 aa19.71■□□□□ 0.75
CNTLN-201ENST00000380641 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
CNTLN-201ENST00000380641 TRIM52Q96A61 297 aa19.65■□□□□ 0.74
CNTLN-201ENST00000380641 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
CNTLN-201ENST00000380641 FBLN2P98095 1184 aa19.63■□□□□ 0.73
CNTLN-201ENST00000380641 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
CNTLN-201ENST00000380641 ARID3CA6NKF2 412 aa19.58■□□□□ 0.73
CNTLN-201ENST00000380641 RB1CC1Q8TDY2 1594 aa19.51■□□□□ 0.71
CNTLN-201ENST00000380641 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
CNTLN-201ENST00000380641 NACADO15069 1562 aa19.43■□□□□ 0.7
CNTLN-201ENST00000380641 ZNF326Q5BKZ1 582 aaKnown RBP19.41■□□□□ 0.7
CNTLN-201ENST00000380641 GTF3C3Q9Y5Q9 886 aa19.37■□□□□ 0.69
CNTLN-201ENST00000380641 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
CNTLN-201ENST00000380641 SLC4A1APQ9BWU0 796 aaKnown RBP19.31■□□□□ 0.68
CNTLN-201ENST00000380641 ZNF777Q9ULD5 760 aaPredicted RBP19.29■□□□□ 0.68
CNTLN-201ENST00000380641 ANP32CO43423 234 aa19.29■□□□□ 0.68
CNTLN-201ENST00000380641 CLIP1P30622 1438 aa19.26■□□□□ 0.67
CNTLN-201ENST00000380641 BCANQ96GW7 911 aa19.24■□□□□ 0.67
CNTLN-201ENST00000380641 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
CNTLN-201ENST00000380641 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
CNTLN-201ENST00000380641 CDK11AQ9UQ88 783 aaPredicted RBP19.19■□□□□ 0.66
CNTLN-201ENST00000380641 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
CNTLN-201ENST00000380641 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
CNTLN-201ENST00000380641 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
CNTLN-201ENST00000380641 EEA1Q15075 1411 aa19.15■□□□□ 0.66
CNTLN-201ENST00000380641 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
CNTLN-201ENST00000380641 CHIC2Q9UKJ5 165 aa19.13■□□□□ 0.65
CNTLN-201ENST00000380641 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
CNTLN-201ENST00000380641 TONSLQ96HA7 1378 aa19.08■□□□□ 0.65
CNTLN-201ENST00000380641 DAXXQ9UER7 740 aaPredicted RBP19.07■□□□□ 0.64
CNTLN-201ENST00000380641 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
CNTLN-201ENST00000380641 DDX10Q13206 875 aaKnown RBP19.05■□□□□ 0.64
CNTLN-201ENST00000380641 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
CNTLN-201ENST00000380641 MYT1Q01538 1121 aa19.02■□□□□ 0.64
CNTLN-201ENST00000380641 SOGA1O94964 1423 aa19.01■□□□□ 0.63
CNTLN-201ENST00000380641 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
CNTLN-201ENST00000380641 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
CNTLN-201ENST00000380641 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
CNTLN-201ENST00000380641 HIRIP3Q9BW71 556 aaPredicted RBP18.94■□□□□ 0.62
CNTLN-201ENST00000380641 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
CNTLN-201ENST00000380641 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
CNTLN-201ENST00000380641 MIER1Q8N108 512 aa18.91■□□□□ 0.62
CNTLN-201ENST00000380641 RRP7BPQ9NSQ0 103 aa18.9■□□□□ 0.62
CNTLN-201ENST00000380641 ABCC8Q09428 1581 aa18.89■□□□□ 0.61
CNTLN-201ENST00000380641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
CNTLN-201ENST00000380641 TSPY4P0CV99 314 aa18.83■□□□□ 0.6
CNTLN-201ENST00000380641 TSPY10P0CW01 314 aa18.83■□□□□ 0.6
CNTLN-201ENST00000380641 HNRNPUQ00839 825 aaKnown RBP eCLIP18.83■□□□□ 0.6
CNTLN-201ENST00000380641 FAM9BQ8IZU0 186 aa18.8■□□□□ 0.6
CNTLN-201ENST00000380641 WIZO95785 1651 aa18.8■□□□□ 0.6
CNTLN-201ENST00000380641 FKBP8Q14318 412 aa18.79■□□□□ 0.6
CNTLN-201ENST00000380641 CHGAP10645 457 aaKnown RBP18.79■□□□□ 0.6
CNTLN-201ENST00000380641 KDM2AQ9Y2K7 1162 aa18.78■□□□□ 0.6
CNTLN-201ENST00000380641 CUX2O14529 1486 aa18.75■□□□□ 0.59
CNTLN-201ENST00000380641 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
CNTLN-201ENST00000380641 NPM1P06748 294 aaKnown RBP eCLIP18.73■□□□□ 0.59
CNTLN-201ENST00000380641 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
CNTLN-201ENST00000380641 RTL5Q5HYW3 569 aaPredicted RBP18.7■□□□□ 0.58
CNTLN-201ENST00000380641 SALL2Q9Y467 1007 aaPredicted RBP18.69■□□□□ 0.58
CNTLN-201ENST00000380641 PLEKHD1A6NEE1 506 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms