RNA–Protein interactions for RNA: ENST00000376678.6

LINC01257-201, Transcript of long intergenic non-protein coding RNA 1257, humanhuman

TSL 1 (best) BASIC

Gene LINC01257, Length 2,473 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01257-201ENST00000376678 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
LINC01257-201ENST00000376678 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
LINC01257-201ENST00000376678 ABCC9O60706 1549 aa25.57■■□□□ 1.68
LINC01257-201ENST00000376678 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
LINC01257-201ENST00000376678 DCAF8L2P0C7V8 631 aa25.21■■□□□ 1.63
LINC01257-201ENST00000376678 DCAF1Q9Y4B6 1507 aa24.94■■□□□ 1.58
LINC01257-201ENST00000376678 NACADO15069 1562 aa24.83■■□□□ 1.57
LINC01257-201ENST00000376678 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
LINC01257-201ENST00000376678 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
LINC01257-201ENST00000376678 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
LINC01257-201ENST00000376678 SCRIBQ14160 1630 aa24.4■■□□□ 1.5
LINC01257-201ENST00000376678 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
LINC01257-201ENST00000376678 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
LINC01257-201ENST00000376678 BICRAQ9NZM4 1560 aa23.97■■□□□ 1.43
LINC01257-201ENST00000376678 CECR2Q9BXF3 1484 aa23.52■■□□□ 1.36
LINC01257-201ENST00000376678 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
LINC01257-201ENST00000376678 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
LINC01257-201ENST00000376678 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
LINC01257-201ENST00000376678 EIF4G1Q04637 1599 aaKnown RBP23.32■■□□□ 1.32
LINC01257-201ENST00000376678 SMARCA4P51532 1647 aa23.32■■□□□ 1.32
LINC01257-201ENST00000376678 RSF1Q96T23 1441 aaPredicted RBP23.26■■□□□ 1.31
LINC01257-201ENST00000376678 WIZO95785 1651 aa23.12■■□□□ 1.29
LINC01257-201ENST00000376678 CC2D2AQ9P2K1 1620 aa23.1■■□□□ 1.29
LINC01257-201ENST00000376678 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
LINC01257-201ENST00000376678 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
LINC01257-201ENST00000376678 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
LINC01257-201ENST00000376678 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
LINC01257-201ENST00000376678 DNAJC5BQ9UF47 199 aa22.93■■□□□ 1.26
LINC01257-201ENST00000376678 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
LINC01257-201ENST00000376678 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
LINC01257-201ENST00000376678 HRCP23327 699 aa22.91■■□□□ 1.26
LINC01257-201ENST00000376678 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
LINC01257-201ENST00000376678 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
LINC01257-201ENST00000376678 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
LINC01257-201ENST00000376678 PCGF6Q9BYE7 350 aa22.56■■□□□ 1.2
LINC01257-201ENST00000376678 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
LINC01257-201ENST00000376678 CADPSQ9ULU8 1353 aa22.33■■□□□ 1.16
LINC01257-201ENST00000376678 CFTRP13569 1480 aa22.3■■□□□ 1.16
LINC01257-201ENST00000376678 NESP48681 1621 aa22.29■■□□□ 1.16
LINC01257-201ENST00000376678 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
LINC01257-201ENST00000376678 PPARGC1BQ86YN6 1023 aaKnown RBP22.25■■□□□ 1.15
LINC01257-201ENST00000376678 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
LINC01257-201ENST00000376678 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
LINC01257-201ENST00000376678 PRDM2Q13029 1718 aa22.13■■□□□ 1.13
LINC01257-201ENST00000376678 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
LINC01257-201ENST00000376678 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
LINC01257-201ENST00000376678 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
LINC01257-201ENST00000376678 CEP164Q9UPV0 1460 aa22.01■■□□□ 1.11
LINC01257-201ENST00000376678 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
LINC01257-201ENST00000376678 ERCC6Q03468 1493 aa22■■□□□ 1.11
LINC01257-201ENST00000376678 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
LINC01257-201ENST00000376678 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
LINC01257-201ENST00000376678 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
LINC01257-201ENST00000376678 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
LINC01257-201ENST00000376678 CUX1P39880 1505 aa21.85■■□□□ 1.09
LINC01257-201ENST00000376678 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.09
LINC01257-201ENST00000376678 URB2Q14146 1524 aaKnown RBP21.82■■□□□ 1.08
LINC01257-201ENST00000376678 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
LINC01257-201ENST00000376678 TOPBP1Q92547 1522 aa21.79■■□□□ 1.08
LINC01257-201ENST00000376678 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
LINC01257-201ENST00000376678 BIVM-ERCC5R4GMW8 1640 aa21.75■■□□□ 1.07
LINC01257-201ENST00000376678 MYT1Q01538 1121 aa21.75■■□□□ 1.07
LINC01257-201ENST00000376678 THOC2Q8NI27 1593 aaKnown RBP21.75■■□□□ 1.07
LINC01257-201ENST00000376678 WDR62O43379 1518 aa21.72■■□□□ 1.07
LINC01257-201ENST00000376678 FGD5Q6ZNL6 1462 aa21.7■■□□□ 1.06
LINC01257-201ENST00000376678 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
LINC01257-201ENST00000376678 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
LINC01257-201ENST00000376678 SOGA1O94964 1423 aa21.59■■□□□ 1.05
LINC01257-201ENST00000376678 FAM9AQ8IZU1 332 aaPredicted RBP21.58■■□□□ 1.05
LINC01257-201ENST00000376678 CUX2O14529 1486 aa21.54■■□□□ 1.04
LINC01257-201ENST00000376678 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
LINC01257-201ENST00000376678 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
LINC01257-201ENST00000376678 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
LINC01257-201ENST00000376678 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
LINC01257-201ENST00000376678 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
LINC01257-201ENST00000376678 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
LINC01257-201ENST00000376678 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
LINC01257-201ENST00000376678 ZNF608Q9ULD9 1512 aaPredicted RBP21.4■■□□□ 1.02
LINC01257-201ENST00000376678 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.01
LINC01257-201ENST00000376678 EEA1Q15075 1411 aa21.36■■□□□ 1.01
LINC01257-201ENST00000376678 GAPVD1Q14C86 1478 aa21.34■■□□□ 1.01
LINC01257-201ENST00000376678 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1
LINC01257-201ENST00000376678 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
LINC01257-201ENST00000376678 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
LINC01257-201ENST00000376678 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
LINC01257-201ENST00000376678 EHMT2Q96KQ7 1210 aa21.28■■□□□ 1
LINC01257-201ENST00000376678 IGF1RP08069 1367 aa21.26■□□□□ 0.99
LINC01257-201ENST00000376678 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
LINC01257-201ENST00000376678 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
LINC01257-201ENST00000376678 ERICH3Q5RHP9 1530 aa21.22■□□□□ 0.99
LINC01257-201ENST00000376678 CARMIL1Q5VZK9 1371 aa21.17■□□□□ 0.98
LINC01257-201ENST00000376678 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
LINC01257-201ENST00000376678 CUL7Q14999 1698 aa21.14■□□□□ 0.97
LINC01257-201ENST00000376678 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
LINC01257-201ENST00000376678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.11■□□□□ 0.97
LINC01257-201ENST00000376678 MAGI1Q96QZ7 1491 aaPredicted RBP21.1■□□□□ 0.97
LINC01257-201ENST00000376678 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
LINC01257-201ENST00000376678 KIF21BO75037 1637 aa21.1■□□□□ 0.97
LINC01257-201ENST00000376678 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
LINC01257-201ENST00000376678 FHAD1B1AJZ9 1412 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms