RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 DCAF8L2P0C7V8 631 aa23.23■■□□□ 1.31
CACNA1C-222ENST00000406454 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
CACNA1C-222ENST00000406454 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
CACNA1C-222ENST00000406454 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
CACNA1C-222ENST00000406454 EHMT2Q96KQ7 1210 aa21.28■■□□□ 1
CACNA1C-222ENST00000406454 APLP2Q06481 763 aa20.92■□□□□ 0.94
CACNA1C-222ENST00000406454 FAM9AQ8IZU1 332 aaPredicted RBP20.85■□□□□ 0.93
CACNA1C-222ENST00000406454 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
CACNA1C-222ENST00000406454 PCGF6Q9BYE7 350 aa20.6■□□□□ 0.89
CACNA1C-222ENST00000406454 TTBK1Q5TCY1 1321 aaPredicted RBP20.57■□□□□ 0.88
CACNA1C-222ENST00000406454 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
CACNA1C-222ENST00000406454 RANGAP1P46060 587 aaPredicted RBP20.39■□□□□ 0.85
CACNA1C-222ENST00000406454 ZEB1P37275 1124 aaPredicted RBP20.29■□□□□ 0.84
CACNA1C-222ENST00000406454 UBTFP17480 764 aaKnown RBP20.24■□□□□ 0.83
CACNA1C-222ENST00000406454 CCER1Q8TC90 406 aaPredicted RBP20.22■□□□□ 0.83
CACNA1C-222ENST00000406454 ATP1B4Q9UN42 357 aaPredicted RBP20.18■□□□□ 0.82
CACNA1C-222ENST00000406454 CENPBP07199 599 aaPredicted RBP20.09■□□□□ 0.81
CACNA1C-222ENST00000406454 PPARGC1BQ86YN6 1023 aaKnown RBP19.87■□□□□ 0.77
CACNA1C-222ENST00000406454 TRIM26Q12899 539 aaPredicted RBP19.83■□□□□ 0.76
CACNA1C-222ENST00000406454 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
CACNA1C-222ENST00000406454 ERICH6Q7L0X2 663 aa19.7■□□□□ 0.74
CACNA1C-222ENST00000406454 LOC105371045A0A1W2PR82 267 aa19.68■□□□□ 0.74
CACNA1C-222ENST00000406454 YTHDC1Q96MU7 727 aaKnown RBP19.68■□□□□ 0.74
CACNA1C-222ENST00000406454 NEFLP07196 543 aa19.63■□□□□ 0.73
CACNA1C-222ENST00000406454 HRCP23327 699 aa19.59■□□□□ 0.73
CACNA1C-222ENST00000406454 ITGAEP38570 1179 aa19.55■□□□□ 0.72
CACNA1C-222ENST00000406454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
CACNA1C-222ENST00000406454 HNRNPUL2Q1KMD3 747 aaKnown RBP19.5■□□□□ 0.71
CACNA1C-222ENST00000406454 MYT1Q01538 1121 aa19.48■□□□□ 0.71
CACNA1C-222ENST00000406454 ABCC9O60706 1549 aa19.4■□□□□ 0.7
CACNA1C-222ENST00000406454 MYT1LQ9UL68 1186 aa19.34■□□□□ 0.69
CACNA1C-222ENST00000406454 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
CACNA1C-222ENST00000406454 POLR3GLQ9BT43 218 aa19.28■□□□□ 0.68
CACNA1C-222ENST00000406454 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
CACNA1C-222ENST00000406454 CNGB1Q14028 1251 aaPredicted RBP19.07■□□□□ 0.64
CACNA1C-222ENST00000406454 DIEXFQ68CQ4 756 aaKnown RBP19.04■□□□□ 0.64
CACNA1C-222ENST00000406454 TRIM52Q96A61 297 aa18.97■□□□□ 0.63
CACNA1C-222ENST00000406454 DAXXQ9UER7 740 aaPredicted RBP18.95■□□□□ 0.62
CACNA1C-222ENST00000406454 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
CACNA1C-222ENST00000406454 SLC4A1APQ9BWU0 796 aaKnown RBP18.87■□□□□ 0.61
CACNA1C-222ENST00000406454 CSRNP3Q8WYN3 585 aa18.86■□□□□ 0.61
CACNA1C-222ENST00000406454 FBLN2P98095 1184 aa18.78■□□□□ 0.6
CACNA1C-222ENST00000406454 ZCCHC6Q5VYS8 1495 aaKnown RBP18.75■□□□□ 0.59
CACNA1C-222ENST00000406454 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
CACNA1C-222ENST00000406454 ZNF326Q5BKZ1 582 aaKnown RBP18.71■□□□□ 0.59
CACNA1C-222ENST00000406454 SCRIBQ14160 1630 aa18.69■□□□□ 0.58
CACNA1C-222ENST00000406454 ANP32CO43423 234 aa18.69■□□□□ 0.58
CACNA1C-222ENST00000406454 ZNF316A6NFI3 1004 aaPredicted RBP18.68■□□□□ 0.58
CACNA1C-222ENST00000406454 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
CACNA1C-222ENST00000406454 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
CACNA1C-222ENST00000406454 GTF3C3Q9Y5Q9 886 aa18.58■□□□□ 0.56
CACNA1C-222ENST00000406454 BCANQ96GW7 911 aa18.56■□□□□ 0.56
CACNA1C-222ENST00000406454 RTL5Q5HYW3 569 aaPredicted RBP18.52■□□□□ 0.56
CACNA1C-222ENST00000406454 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
CACNA1C-222ENST00000406454 ZNF777Q9ULD5 760 aaPredicted RBP18.5■□□□□ 0.55
CACNA1C-222ENST00000406454 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
CACNA1C-222ENST00000406454 CCDC180Q9P1Z9 1646 aa18.38■□□□□ 0.53
CACNA1C-222ENST00000406454 ACIN1Q9UKV3 1341 aaKnown RBP18.37■□□□□ 0.53
CACNA1C-222ENST00000406454 TONSLQ96HA7 1378 aa18.34■□□□□ 0.53
CACNA1C-222ENST00000406454 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
CACNA1C-222ENST00000406454 CANXP27824 592 aaKnown RBP18.3■□□□□ 0.52
CACNA1C-222ENST00000406454 NEFMP07197 916 aa18.27■□□□□ 0.52
CACNA1C-222ENST00000406454 CHIC2Q9UKJ5 165 aa18.2■□□□□ 0.5
CACNA1C-222ENST00000406454 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
CACNA1C-222ENST00000406454 CLIP1P30622 1438 aa18.18■□□□□ 0.5
CACNA1C-222ENST00000406454 DDX10Q13206 875 aaKnown RBP18.17■□□□□ 0.5
CACNA1C-222ENST00000406454 SLC24A1O60721 1099 aa18.16■□□□□ 0.5
CACNA1C-222ENST00000406454 RB1CC1Q8TDY2 1594 aa18.16■□□□□ 0.5
CACNA1C-222ENST00000406454 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
CACNA1C-222ENST00000406454 MTUS2Q5JR59 1369 aa18.15■□□□□ 0.5
CACNA1C-222ENST00000406454 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.5
CACNA1C-222ENST00000406454 ESF1Q9H501 851 aaKnown RBP18.14■□□□□ 0.49
CACNA1C-222ENST00000406454 EEA1Q15075 1411 aa18.11■□□□□ 0.49
CACNA1C-222ENST00000406454 HNRNPUQ00839 825 aaKnown RBP eCLIP18.11■□□□□ 0.49
CACNA1C-222ENST00000406454 BCL11AQ9H165 835 aa18.11■□□□□ 0.49
CACNA1C-222ENST00000406454 FKBP8Q14318 412 aa18.09■□□□□ 0.49
CACNA1C-222ENST00000406454 TSPY4P0CV99 314 aa18.09■□□□□ 0.49
CACNA1C-222ENST00000406454 TSPY10P0CW01 314 aa18.09■□□□□ 0.49
CACNA1C-222ENST00000406454 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.48
CACNA1C-222ENST00000406454 FAM9BQ8IZU0 186 aa18.08■□□□□ 0.48
CACNA1C-222ENST00000406454 ANP32AP39687 249 aaKnown RBP18.07■□□□□ 0.48
CACNA1C-222ENST00000406454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.48
CACNA1C-222ENST00000406454 CHMP7Q8WUX9 453 aaPredicted RBP18.07■□□□□ 0.48
CACNA1C-222ENST00000406454 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
CACNA1C-222ENST00000406454 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
CACNA1C-222ENST00000406454 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
CACNA1C-222ENST00000406454 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
CACNA1C-222ENST00000406454 NACADO15069 1562 aa18■□□□□ 0.47
CACNA1C-222ENST00000406454 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
CACNA1C-222ENST00000406454 TMC1Q8TDI8 760 aa17.98■□□□□ 0.47
CACNA1C-222ENST00000406454 KDM2AQ9Y2K7 1162 aa17.97■□□□□ 0.47
CACNA1C-222ENST00000406454 BAZ1BQ9UIG0 1483 aaKnown RBP17.96■□□□□ 0.47
CACNA1C-222ENST00000406454 RRP7BPQ9NSQ0 103 aa17.95■□□□□ 0.46
CACNA1C-222ENST00000406454 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
CACNA1C-222ENST00000406454 MRS2Q9HD23 443 aa17.94■□□□□ 0.46
CACNA1C-222ENST00000406454 TNIKQ9UKE5 1360 aa17.93■□□□□ 0.46
CACNA1C-222ENST00000406454 MIER1Q8N108 512 aa17.92■□□□□ 0.46
CACNA1C-222ENST00000406454 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
CACNA1C-222ENST00000406454 EIF4G2P78344 907 aaKnown RBP eCLIP17.9■□□□□ 0.46
CACNA1C-222ENST00000406454 HIRIP3Q9BW71 556 aaPredicted RBP17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms