Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.48■□□□□ 0.23
RARAP10276 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.48■□□□□ 0.23
RARAP10276 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RARAP10276 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RARAP10276 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.48■□□□□ 0.23
RARAP10276 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.48■□□□□ 0.23
RARAP10276 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
RARAP10276 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.48■□□□□ 0.23
RARAP10276 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.47■□□□□ 0.23
RARAP10276 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RARAP10276 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RARAP10276 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.47■□□□□ 0.23
RARAP10276 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RARAP10276 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.47■□□□□ 0.23
RARAP10276 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RARAP10276 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.47■□□□□ 0.23
RARAP10276 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.47■□□□□ 0.23
RARAP10276 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.47■□□□□ 0.23
RARAP10276 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.47■□□□□ 0.23
RARAP10276 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.47■□□□□ 0.23
RARAP10276 AL589739.1-201ENST00000607720 493 ntBASIC16.47■□□□□ 0.23
RARAP10276 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RARAP10276 CICP23-201ENST00000605013 2741 ntBASIC16.47■□□□□ 0.23
RARAP10276 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.47■□□□□ 0.23
RARAP10276 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.47■□□□□ 0.23
RARAP10276 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RARAP10276 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RARAP10276 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RARAP10276 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RARAP10276 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.46■□□□□ 0.23
RARAP10276 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RARAP10276 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RARAP10276 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
RARAP10276 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RARAP10276 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RARAP10276 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RARAP10276 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RARAP10276 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RARAP10276 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.46■□□□□ 0.23
RARAP10276 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RARAP10276 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RARAP10276 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.46■□□□□ 0.23
RARAP10276 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.46■□□□□ 0.23
RARAP10276 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
RARAP10276 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.46■□□□□ 0.23
RARAP10276 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RARAP10276 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RARAP10276 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.46■□□□□ 0.23
RARAP10276 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.46■□□□□ 0.23
RARAP10276 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.46■□□□□ 0.23
RARAP10276 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.46■□□□□ 0.23
RARAP10276 AC079781.4-201ENST00000641908 219 ntBASIC16.46■□□□□ 0.23
RARAP10276 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RARAP10276 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.46■□□□□ 0.23
RARAP10276 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RARAP10276 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RARAP10276 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.46■□□□□ 0.22
RARAP10276 CICP4-201ENST00000447359 2812 ntBASIC16.46■□□□□ 0.22
RARAP10276 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
RARAP10276 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RARAP10276 LINC00528-201ENST00000600723 2160 ntBASIC16.45■□□□□ 0.22
RARAP10276 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RARAP10276 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RARAP10276 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.45■□□□□ 0.22
RARAP10276 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RARAP10276 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RARAP10276 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RARAP10276 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RARAP10276 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RARAP10276 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms