Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.87■□□□□ 0.13
WNT3AP56704 AC138035.3-201ENST00000622706 2791 ntBASIC15.87■□□□□ 0.13
WNT3AP56704 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.86■□□□□ 0.13
WNT3AP56704 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.86■□□□□ 0.13
WNT3AP56704 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.86■□□□□ 0.13
WNT3AP56704 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.86■□□□□ 0.13
WNT3AP56704 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.86■□□□□ 0.13
WNT3AP56704 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
WNT3AP56704 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.86■□□□□ 0.13
WNT3AP56704 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
WNT3AP56704 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.86■□□□□ 0.13
WNT3AP56704 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.86■□□□□ 0.13
WNT3AP56704 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.86■□□□□ 0.13
WNT3AP56704 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 AL109954.1-202ENST00000564051 2148 ntBASIC15.86■□□□□ 0.13
WNT3AP56704 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
WNT3AP56704 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.86■□□□□ 0.13
WNT3AP56704 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
WNT3AP56704 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
WNT3AP56704 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
WNT3AP56704 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.85■□□□□ 0.13
WNT3AP56704 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
WNT3AP56704 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.85■□□□□ 0.13
WNT3AP56704 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.85■□□□□ 0.13
WNT3AP56704 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.85■□□□□ 0.13
WNT3AP56704 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.85■□□□□ 0.13
WNT3AP56704 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.85■□□□□ 0.13
WNT3AP56704 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.85■□□□□ 0.13
WNT3AP56704 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.85■□□□□ 0.13
WNT3AP56704 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.85■□□□□ 0.13
WNT3AP56704 AC004890.2-204ENST00000481968 304 ntBASIC15.85■□□□□ 0.13
WNT3AP56704 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
WNT3AP56704 AC005498.2-205ENST00000593218 784 ntBASIC15.85■□□□□ 0.13
WNT3AP56704 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.85■□□□□ 0.13
WNT3AP56704 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
WNT3AP56704 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
WNT3AP56704 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
WNT3AP56704 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.85■□□□□ 0.13
WNT3AP56704 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.85■□□□□ 0.13
WNT3AP56704 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.85■□□□□ 0.13
WNT3AP56704 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.85■□□□□ 0.13
WNT3AP56704 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
WNT3AP56704 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
WNT3AP56704 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
WNT3AP56704 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
WNT3AP56704 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
WNT3AP56704 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.84■□□□□ 0.13
WNT3AP56704 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
WNT3AP56704 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms