RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.52
TUBA3E-201ENST00000312988 CCDC180Q9P1Z9 1646 aa32.71■■■□□ 2.83
TUBA3E-201ENST00000312988 ABCC9O60706 1549 aa31.61■■■□□ 2.65
TUBA3E-201ENST00000312988 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
TUBA3E-201ENST00000312988 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
TUBA3E-201ENST00000312988 NACADO15069 1562 aa30.65■■■□□ 2.5
TUBA3E-201ENST00000312988 DCAF1Q9Y4B6 1507 aa30.65■■■□□ 2.5
TUBA3E-201ENST00000312988 RB1CC1Q8TDY2 1594 aa30.59■■■□□ 2.49
TUBA3E-201ENST00000312988 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.49
TUBA3E-201ENST00000312988 SCRIBQ14160 1630 aa29.97■■■□□ 2.39
TUBA3E-201ENST00000312988 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
TUBA3E-201ENST00000312988 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
TUBA3E-201ENST00000312988 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.34
TUBA3E-201ENST00000312988 BICRAQ9NZM4 1560 aa29.6■■■□□ 2.33
TUBA3E-201ENST00000312988 CECR2Q9BXF3 1484 aa28.84■■■□□ 2.21
TUBA3E-201ENST00000312988 EIF4G1Q04637 1599 aaKnown RBP28.81■■■□□ 2.2
TUBA3E-201ENST00000312988 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
TUBA3E-201ENST00000312988 SMARCA4P51532 1647 aa28.67■■■□□ 2.18
TUBA3E-201ENST00000312988 MROH2BQ7Z745 1585 aa28.6■■■□□ 2.17
TUBA3E-201ENST00000312988 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
TUBA3E-201ENST00000312988 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
TUBA3E-201ENST00000312988 RSF1Q96T23 1441 aaPredicted RBP28.45■■■□□ 2.14
TUBA3E-201ENST00000312988 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
TUBA3E-201ENST00000312988 ATAD2BQ9ULI0 1458 aa28.37■■■□□ 2.13
TUBA3E-201ENST00000312988 WIZO95785 1651 aa28.33■■■□□ 2.13
TUBA3E-201ENST00000312988 PEG3Q9GZU2 1588 aa28.32■■■□□ 2.12
TUBA3E-201ENST00000312988 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
TUBA3E-201ENST00000312988 SUPT5HO00267 1087 aaKnown RBP28.23■■■□□ 2.11
TUBA3E-201ENST00000312988 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
TUBA3E-201ENST00000312988 HMGXB3Q12766 1538 aa28.18■■■□□ 2.1
TUBA3E-201ENST00000312988 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
TUBA3E-201ENST00000312988 CCDC88BA6NC98 1476 aa27.72■■■□□ 2.03
TUBA3E-201ENST00000312988 CADPSQ9ULU8 1353 aa27.5■■□□□ 1.99
TUBA3E-201ENST00000312988 NESP48681 1621 aa27.48■■□□□ 1.99
TUBA3E-201ENST00000312988 LAMC3Q9Y6N6 1575 aa27.45■■□□□ 1.99
TUBA3E-201ENST00000312988 CFTRP13569 1480 aa27.42■■□□□ 1.98
TUBA3E-201ENST00000312988 PDS5BQ9NTI5 1447 aa27.28■■□□□ 1.96
TUBA3E-201ENST00000312988 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
TUBA3E-201ENST00000312988 ERCC6Q03468 1493 aa27.23■■□□□ 1.95
TUBA3E-201ENST00000312988 FANCD2Q9BXW9 1451 aa27.2■■□□□ 1.95
TUBA3E-201ENST00000312988 KIF21AQ7Z4S6 1674 aa27.16■■□□□ 1.94
TUBA3E-201ENST00000312988 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
TUBA3E-201ENST00000312988 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
TUBA3E-201ENST00000312988 THOC2Q8NI27 1593 aaKnown RBP26.91■■□□□ 1.9
TUBA3E-201ENST00000312988 ABCC8Q09428 1581 aa26.89■■□□□ 1.9
TUBA3E-201ENST00000312988 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
TUBA3E-201ENST00000312988 WRNQ14191 1432 aaPredicted RBP eCLIP26.84■■□□□ 1.89
TUBA3E-201ENST00000312988 WDR62O43379 1518 aa26.83■■□□□ 1.89
TUBA3E-201ENST00000312988 DNMBPQ6XZF7 1577 aa26.82■■□□□ 1.88
TUBA3E-201ENST00000312988 TOPBP1Q92547 1522 aa26.81■■□□□ 1.88
TUBA3E-201ENST00000312988 CUX1P39880 1505 aa26.8■■□□□ 1.88
TUBA3E-201ENST00000312988 SYNJ1O43426 1573 aa26.73■■□□□ 1.87
TUBA3E-201ENST00000312988 TOP2BQ02880 1626 aa26.69■■□□□ 1.86
TUBA3E-201ENST00000312988 BIVM-ERCC5R4GMW8 1640 aa26.68■■□□□ 1.86
TUBA3E-201ENST00000312988 CUX2O14529 1486 aa26.67■■□□□ 1.86
TUBA3E-201ENST00000312988 FGD5Q6ZNL6 1462 aa26.65■■□□□ 1.86
TUBA3E-201ENST00000312988 TRIM41Q8WV44 630 aa26.62■■□□□ 1.85
TUBA3E-201ENST00000312988 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
TUBA3E-201ENST00000312988 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
TUBA3E-201ENST00000312988 SOGA1O94964 1423 aa26.54■■□□□ 1.84
TUBA3E-201ENST00000312988 IFT140Q96RY7 1462 aa26.52■■□□□ 1.84
TUBA3E-201ENST00000312988 RAD54L2Q9Y4B4 1467 aa26.52■■□□□ 1.84
TUBA3E-201ENST00000312988 TARBP1Q13395 1621 aaKnown RBP26.45■■□□□ 1.82
TUBA3E-201ENST00000312988 ABCA10Q8WWZ4 1543 aa26.38■■□□□ 1.81
TUBA3E-201ENST00000312988 ZNF608Q9ULD9 1512 aaPredicted RBP26.36■■□□□ 1.81
TUBA3E-201ENST00000312988 WDR97A6NE52 1622 aa26.35■■□□□ 1.81
TUBA3E-201ENST00000312988 TDRD9Q8NDG6 1382 aaKnown RBP26.34■■□□□ 1.81
TUBA3E-201ENST00000312988 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.8
TUBA3E-201ENST00000312988 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
TUBA3E-201ENST00000312988 KIF27Q86VH2 1401 aa26.25■■□□□ 1.79
TUBA3E-201ENST00000312988 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
TUBA3E-201ENST00000312988 ABCA5Q8WWZ7 1642 aa26.23■■□□□ 1.79
TUBA3E-201ENST00000312988 GRIN2BQ13224 1484 aa26.16■■□□□ 1.78
TUBA3E-201ENST00000312988 RUSC2Q8N2Y8 1516 aa26.15■■□□□ 1.78
TUBA3E-201ENST00000312988 PBRM1Q86U86 1689 aa26.14■■□□□ 1.78
TUBA3E-201ENST00000312988 FAM9AQ8IZU1 332 aaPredicted RBP26.1■■□□□ 1.77
TUBA3E-201ENST00000312988 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.76
TUBA3E-201ENST00000312988 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
TUBA3E-201ENST00000312988 EEA1Q15075 1411 aa26.07■■□□□ 1.76
TUBA3E-201ENST00000312988 IGF1RP08069 1367 aa26.04■■□□□ 1.76
TUBA3E-201ENST00000312988 MAGI1Q96QZ7 1491 aaPredicted RBP26.02■■□□□ 1.76
TUBA3E-201ENST00000312988 CSRNP3Q8WYN3 585 aa25.98■■□□□ 1.75
TUBA3E-201ENST00000312988 FBLN2P98095 1184 aa25.97■■□□□ 1.75
TUBA3E-201ENST00000312988 ADAMTS12P58397 1594 aa25.96■■□□□ 1.75
TUBA3E-201ENST00000312988 CUL7Q14999 1698 aa25.95■■□□□ 1.75
TUBA3E-201ENST00000312988 FHAD1B1AJZ9 1412 aa25.95■■□□□ 1.74
TUBA3E-201ENST00000312988 CHMP7Q8WUX9 453 aaPredicted RBP25.93■■□□□ 1.74
TUBA3E-201ENST00000312988 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
TUBA3E-201ENST00000312988 SYNJ2O15056 1496 aa25.92■■□□□ 1.74
TUBA3E-201ENST00000312988 CHD1O14646 1710 aa25.86■■□□□ 1.73
TUBA3E-201ENST00000312988 PRXQ9BXM0 1461 aa25.83■■□□□ 1.73
TUBA3E-201ENST00000312988 RAPGEF2Q9Y4G8 1499 aa25.83■■□□□ 1.73
TUBA3E-201ENST00000312988 GRIN2AQ12879 1464 aa25.82■■□□□ 1.72
TUBA3E-201ENST00000312988 EHMT2Q96KQ7 1210 aa25.78■■□□□ 1.72
TUBA3E-201ENST00000312988 KIF21BO75037 1637 aa25.75■■□□□ 1.71
TUBA3E-201ENST00000312988 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
TUBA3E-201ENST00000312988 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
TUBA3E-201ENST00000312988 CEP170Q5SW79 1584 aa25.66■■□□□ 1.7
TUBA3E-201ENST00000312988 NUP160Q12769 1436 aa25.66■■□□□ 1.7
TUBA3E-201ENST00000312988 UBTFP17480 764 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms