Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.68■□□□□ 0.1
LDB2O43679 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.68■□□□□ 0.1
LDB2O43679 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.68■□□□□ 0.1
LDB2O43679 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LDB2O43679 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.68■□□□□ 0.1
LDB2O43679 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.68■□□□□ 0.1
LDB2O43679 BTBD7P1-201ENST00000447253 1453 ntBASIC15.68■□□□□ 0.1
LDB2O43679 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.68■□□□□ 0.1
LDB2O43679 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.68■□□□□ 0.1
LDB2O43679 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.68■□□□□ 0.1
LDB2O43679 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.68■□□□□ 0.1
LDB2O43679 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.68■□□□□ 0.1
LDB2O43679 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.68■□□□□ 0.1
LDB2O43679 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.68■□□□□ 0.1
LDB2O43679 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LDB2O43679 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.68■□□□□ 0.1
LDB2O43679 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.68■□□□□ 0.1
LDB2O43679 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LDB2O43679 AC008738.7-201ENST00000609744 511 ntBASIC15.68■□□□□ 0.1
LDB2O43679 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.68■□□□□ 0.1
LDB2O43679 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.68■□□□□ 0.1
LDB2O43679 AC126365.1-201ENST00000578585 1514 ntBASIC15.68■□□□□ 0.1
LDB2O43679 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.68■□□□□ 0.1
LDB2O43679 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.68■□□□□ 0.1
LDB2O43679 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.68■□□□□ 0.1
LDB2O43679 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LDB2O43679 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LDB2O43679 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 AL133267.1-201ENST00000398220 340 ntBASIC15.67■□□□□ 0.1
LDB2O43679 FAM8A3P-201ENST00000427218 844 ntBASIC15.67■□□□□ 0.1
LDB2O43679 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.67■□□□□ 0.1
LDB2O43679 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.67■□□□□ 0.1
LDB2O43679 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 AC092337.1-201ENST00000568699 1129 ntBASIC15.67■□□□□ 0.1
LDB2O43679 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.67■□□□□ 0.1
LDB2O43679 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.67■□□□□ 0.1
LDB2O43679 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 AC004840.1-201ENST00000636359 365 ntBASIC15.67■□□□□ 0.1
LDB2O43679 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.67■□□□□ 0.1
LDB2O43679 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
LDB2O43679 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.67■□□□□ 0.1
LDB2O43679 DBET-201ENST00000630918 3363 ntBASIC15.67■□□□□ 0.1
LDB2O43679 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.67■□□□□ 0.1
LDB2O43679 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
LDB2O43679 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LDB2O43679 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LDB2O43679 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.66■□□□□ 0.1
LDB2O43679 AC022144.1-201ENST00000602255 1580 ntBASIC15.66■□□□□ 0.1
LDB2O43679 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.66■□□□□ 0.1
LDB2O43679 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.66■□□□□ 0.1
LDB2O43679 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms