Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 RN7SL618P-201ENST00000477850 296 ntBASIC14.03□□□□□ -0.16
CSNK1A1P48729 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 AC027369.6-201ENST00000525520 931 ntBASIC14.03□□□□□ -0.16
CSNK1A1P48729 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 TEX28P1-201ENST00000613479 1221 ntBASIC14.03□□□□□ -0.16
CSNK1A1P48729 TEX28P2-201ENST00000617764 1221 ntBASIC14.03□□□□□ -0.16
CSNK1A1P48729 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 AL607033.1-201ENST00000623900 1599 ntBASIC14.03□□□□□ -0.16
CSNK1A1P48729 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 AC020658.6-201ENST00000623564 1870 ntBASIC14.03□□□□□ -0.16
CSNK1A1P48729 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK1A1P48729 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK1A1P48729 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK1A1P48729 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK1A1P48729 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK1A1P48729 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK1A1P48729 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.02□□□□□ -0.16
CSNK1A1P48729 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK1A1P48729 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK1A1P48729 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.02□□□□□ -0.16
CSNK1A1P48729 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK1A1P48729 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CSNK1A1P48729 AC087481.3-201ENST00000602886 1894 ntBASIC14.02□□□□□ -0.16
CSNK1A1P48729 MYO15B-237ENST00000642007 4893 ntBASIC14.02□□□□□ -0.16
CSNK1A1P48729 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK1A1P48729 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK1A1P48729 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.02□□□□□ -0.16
CSNK1A1P48729 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK1A1P48729 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK1A1P48729 MIR943-201ENST00000401286 94 ntBASIC14.02□□□□□ -0.17
CSNK1A1P48729 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.02□□□□□ -0.17
CSNK1A1P48729 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 IGHV3-42-201ENST00000520410 361 ntBASIC14.02□□□□□ -0.17
CSNK1A1P48729 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 AL158211.3-201ENST00000607385 239 ntBASIC14.02□□□□□ -0.17
CSNK1A1P48729 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK1A1P48729 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK1A1P48729 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK1A1P48729 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK1A1P48729 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK1A1P48729 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK1A1P48729 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK1A1P48729 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK1A1P48729 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK1A1P48729 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.02□□□□□ -0.17
CSNK1A1P48729 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.01□□□□□ -0.17
CSNK1A1P48729 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSNK1A1P48729 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSNK1A1P48729 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSNK1A1P48729 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.01□□□□□ -0.17
CSNK1A1P48729 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSNK1A1P48729 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CSNK1A1P48729 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.01□□□□□ -0.17
CSNK1A1P48729 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.01□□□□□ -0.17
CSNK1A1P48729 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.01□□□□□ -0.17
CSNK1A1P48729 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSNK1A1P48729 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSNK1A1P48729 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSNK1A1P48729 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms