Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
PCDHGA2Q9Y5H1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHGA2Q9Y5H1 AL449106.1-201ENST00000608517 1980 ntBASIC23.74■■□□□ 1.39
PCDHGA2Q9Y5H1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA2Q9Y5H1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA2Q9Y5H1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA2Q9Y5H1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.73■■□□□ 1.39
PCDHGA2Q9Y5H1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA2Q9Y5H1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PCDHGA2Q9Y5H1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHGA2Q9Y5H1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA2Q9Y5H1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PCDHGA2Q9Y5H1 AC024257.2-201ENST00000549699 147 ntBASIC23.72■■□□□ 1.39
PCDHGA2Q9Y5H1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA2Q9Y5H1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PCDHGA2Q9Y5H1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA2Q9Y5H1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA2Q9Y5H1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA2Q9Y5H1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA2Q9Y5H1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA2Q9Y5H1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHGA2Q9Y5H1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHGA2Q9Y5H1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHGA2Q9Y5H1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 AC097381.1-201ENST00000429019 1296 ntBASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 SRD5A1P1-201ENST00000442297 786 ntBASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
PCDHGA2Q9Y5H1 AF131216.4-201ENST00000638924 1588 ntBASIC23.69■■□□□ 1.38
PCDHGA2Q9Y5H1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA2Q9Y5H1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGA2Q9Y5H1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGA2Q9Y5H1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGA2Q9Y5H1 AL136967.2-201ENST00000623968 743 ntBASIC23.69■■□□□ 1.38
PCDHGA2Q9Y5H1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA2Q9Y5H1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA2Q9Y5H1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDHGA2Q9Y5H1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA2Q9Y5H1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA2Q9Y5H1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PCDHGA2Q9Y5H1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGA2Q9Y5H1 MIR6722-201ENST00000617286 78 ntBASIC23.67■■□□□ 1.38
PCDHGA2Q9Y5H1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDHGA2Q9Y5H1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.67■■□□□ 1.38
PCDHGA2Q9Y5H1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
PCDHGA2Q9Y5H1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.67■■□□□ 1.38
PCDHGA2Q9Y5H1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDHGA2Q9Y5H1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHGA2Q9Y5H1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA2Q9Y5H1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA2Q9Y5H1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA2Q9Y5H1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA2Q9Y5H1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHGA2Q9Y5H1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA2Q9Y5H1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.65■■□□□ 1.38
PCDHGA2Q9Y5H1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGA2Q9Y5H1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGA2Q9Y5H1 AF213884.3-201ENST00000563833 479 ntBASIC23.65■■□□□ 1.38
PCDHGA2Q9Y5H1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGA2Q9Y5H1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGA2Q9Y5H1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA2Q9Y5H1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHGA2Q9Y5H1 AL162430.1-201ENST00000480705 870 ntBASIC23.64■■□□□ 1.37
PCDHGA2Q9Y5H1 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.64■■□□□ 1.37
PCDHGA2Q9Y5H1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHGA2Q9Y5H1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA2Q9Y5H1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA2Q9Y5H1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA2Q9Y5H1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA2Q9Y5H1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PCDHGA2Q9Y5H1 MIR939-201ENST00000401314 82 ntBASIC23.63■■□□□ 1.37
PCDHGA2Q9Y5H1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA2Q9Y5H1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHGA2Q9Y5H1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA2Q9Y5H1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGA2Q9Y5H1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PCDHGA2Q9Y5H1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA2Q9Y5H1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
PCDHGA2Q9Y5H1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PCDHGA2Q9Y5H1 SNX5-217ENST00000606557 1087 ntBASIC23.61■■□□□ 1.37
PCDHGA2Q9Y5H1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA2Q9Y5H1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA2Q9Y5H1 AC142472.1-201ENST00000612013 1741 ntBASIC23.6■■□□□ 1.37
PCDHGA2Q9Y5H1 AC091305.1-201ENST00000479476 895 ntBASIC23.6■■□□□ 1.37
PCDHGA2Q9Y5H1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA2Q9Y5H1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHGA2Q9Y5H1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PCDHGA2Q9Y5H1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA2Q9Y5H1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA2Q9Y5H1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms