Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.25■■□□□ 1.15
SRFBP1Q8NEF9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.25■■□□□ 1.15
SRFBP1Q8NEF9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.25■■□□□ 1.15
SRFBP1Q8NEF9 PVT1_1.1-201ENST00000615125 194 ntBASIC22.25■■□□□ 1.15
SRFBP1Q8NEF9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SRFBP1Q8NEF9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SRFBP1Q8NEF9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.25■■□□□ 1.15
SRFBP1Q8NEF9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SRFBP1Q8NEF9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SRFBP1Q8NEF9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.24■■□□□ 1.15
SRFBP1Q8NEF9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SRFBP1Q8NEF9 MIR4508-201ENST00000584178 70 ntBASIC22.24■■□□□ 1.15
SRFBP1Q8NEF9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SRFBP1Q8NEF9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SRFBP1Q8NEF9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SRFBP1Q8NEF9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SRFBP1Q8NEF9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SRFBP1Q8NEF9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SRFBP1Q8NEF9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SRFBP1Q8NEF9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SRFBP1Q8NEF9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SRFBP1Q8NEF9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SRFBP1Q8NEF9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.23■■□□□ 1.15
SRFBP1Q8NEF9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SRFBP1Q8NEF9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SRFBP1Q8NEF9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SRFBP1Q8NEF9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SRFBP1Q8NEF9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.22■■□□□ 1.15
SRFBP1Q8NEF9 YBX1P4-201ENST00000392794 808 ntBASIC22.21■■□□□ 1.15
SRFBP1Q8NEF9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SRFBP1Q8NEF9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SRFBP1Q8NEF9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SRFBP1Q8NEF9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SRFBP1Q8NEF9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SRFBP1Q8NEF9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.2■■□□□ 1.14
SRFBP1Q8NEF9 KRT18P24-201ENST00000344739 1156 ntBASIC22.2■■□□□ 1.14
SRFBP1Q8NEF9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
SRFBP1Q8NEF9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.2■■□□□ 1.14
SRFBP1Q8NEF9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SRFBP1Q8NEF9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.19■■□□□ 1.14
SRFBP1Q8NEF9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
SRFBP1Q8NEF9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.19■■□□□ 1.14
SRFBP1Q8NEF9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SRFBP1Q8NEF9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SRFBP1Q8NEF9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SRFBP1Q8NEF9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.18■■□□□ 1.14
SRFBP1Q8NEF9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SRFBP1Q8NEF9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.18■■□□□ 1.14
SRFBP1Q8NEF9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.18■■□□□ 1.14
SRFBP1Q8NEF9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SRFBP1Q8NEF9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.17■■□□□ 1.14
SRFBP1Q8NEF9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
SRFBP1Q8NEF9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SRFBP1Q8NEF9 THA1P-201ENST00000590384 1145 ntBASIC22.17■■□□□ 1.14
SRFBP1Q8NEF9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.17■■□□□ 1.14
SRFBP1Q8NEF9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SRFBP1Q8NEF9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 AL139125.2-201ENST00000623134 1869 ntBASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SRFBP1Q8NEF9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SRFBP1Q8NEF9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SRFBP1Q8NEF9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.15■■□□□ 1.14
SRFBP1Q8NEF9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SRFBP1Q8NEF9 AC120024.1-201ENST00000562672 995 ntBASIC22.15■■□□□ 1.14
SRFBP1Q8NEF9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
SRFBP1Q8NEF9 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.15■■□□□ 1.14
SRFBP1Q8NEF9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SRFBP1Q8NEF9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SRFBP1Q8NEF9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SRFBP1Q8NEF9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SRFBP1Q8NEF9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SRFBP1Q8NEF9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SRFBP1Q8NEF9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.14■■□□□ 1.13
SRFBP1Q8NEF9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.14■■□□□ 1.13
SRFBP1Q8NEF9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.14■■□□□ 1.13
SRFBP1Q8NEF9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SRFBP1Q8NEF9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms