Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SYNPOQ8N3V7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SYNPOQ8N3V7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
SYNPOQ8N3V7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SYNPOQ8N3V7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SYNPOQ8N3V7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SYNPOQ8N3V7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SYNPOQ8N3V7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.84■■□□□ 1.41
SYNPOQ8N3V7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.84■■□□□ 1.41
SYNPOQ8N3V7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SYNPOQ8N3V7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SYNPOQ8N3V7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYNPOQ8N3V7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SYNPOQ8N3V7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.84■■□□□ 1.41
SYNPOQ8N3V7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SYNPOQ8N3V7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYNPOQ8N3V7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYNPOQ8N3V7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SYNPOQ8N3V7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SYNPOQ8N3V7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SYNPOQ8N3V7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.83■■□□□ 1.41
SYNPOQ8N3V7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.83■■□□□ 1.41
SYNPOQ8N3V7 AC142381.2-201ENST00000566120 298 ntBASIC23.83■■□□□ 1.41
SYNPOQ8N3V7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.83■■□□□ 1.41
SYNPOQ8N3V7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SYNPOQ8N3V7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SYNPOQ8N3V7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SYNPOQ8N3V7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SYNPOQ8N3V7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPOQ8N3V7 AC090877.2-201ENST00000558441 1738 ntBASIC23.82■■□□□ 1.4
SYNPOQ8N3V7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPOQ8N3V7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPOQ8N3V7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPOQ8N3V7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPOQ8N3V7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.82■■□□□ 1.4
SYNPOQ8N3V7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPOQ8N3V7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNPOQ8N3V7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SYNPOQ8N3V7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.81■■□□□ 1.4
SYNPOQ8N3V7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPOQ8N3V7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SYNPOQ8N3V7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.81■■□□□ 1.4
SYNPOQ8N3V7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.81■■□□□ 1.4
SYNPOQ8N3V7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.81■■□□□ 1.4
SYNPOQ8N3V7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPOQ8N3V7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPOQ8N3V7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPOQ8N3V7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYNPOQ8N3V7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SYNPOQ8N3V7 UNC93B3-201ENST00000308076 687 ntBASIC23.8■■□□□ 1.4
SYNPOQ8N3V7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.8■■□□□ 1.4
SYNPOQ8N3V7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.79■■□□□ 1.4
SYNPOQ8N3V7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNPOQ8N3V7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SYNPOQ8N3V7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.79■■□□□ 1.4
SYNPOQ8N3V7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.79■■□□□ 1.4
SYNPOQ8N3V7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNPOQ8N3V7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.79■■□□□ 1.4
SYNPOQ8N3V7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPOQ8N3V7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.78■■□□□ 1.4
SYNPOQ8N3V7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPOQ8N3V7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNPOQ8N3V7 ZNRF2P3-201ENST00000424200 374 ntBASIC23.78■■□□□ 1.4
SYNPOQ8N3V7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPOQ8N3V7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPOQ8N3V7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNPOQ8N3V7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPOQ8N3V7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNPOQ8N3V7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SYNPOQ8N3V7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
SYNPOQ8N3V7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SYNPOQ8N3V7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SYNPOQ8N3V7 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.77■■□□□ 1.4
SYNPOQ8N3V7 SUDS3P1-201ENST00000505831 966 ntBASIC23.77■■□□□ 1.4
SYNPOQ8N3V7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.77■■□□□ 1.4
SYNPOQ8N3V7 RARRES2P6-201ENST00000567333 442 ntBASIC23.77■■□□□ 1.4
SYNPOQ8N3V7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 EDA-201ENST00000338901 1233 ntBASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 SRD5A1P1-201ENST00000442297 786 ntBASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 AL136162.1-201ENST00000607711 1078 ntBASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SYNPOQ8N3V7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.75■■□□□ 1.39
SYNPOQ8N3V7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYNPOQ8N3V7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYNPOQ8N3V7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SYNPOQ8N3V7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SYNPOQ8N3V7 AC135279.3-201ENST00000610945 1311 ntBASIC23.75■■□□□ 1.39
SYNPOQ8N3V7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYNPOQ8N3V7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYNPOQ8N3V7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYNPOQ8N3V7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SYNPOQ8N3V7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms