Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CCDC116Q8IYX3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.98■■□□□ 1.11
CCDC116Q8IYX3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC116Q8IYX3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC116Q8IYX3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC116Q8IYX3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 AC019171.1-201ENST00000601251 1056 ntBASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CCDC116Q8IYX3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC116Q8IYX3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC116Q8IYX3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC116Q8IYX3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC116Q8IYX3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
CCDC116Q8IYX3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC116Q8IYX3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC116Q8IYX3 AC010980.1-201ENST00000587192 1142 ntBASIC21.94■■□□□ 1.1
CCDC116Q8IYX3 PVT1_1.1-201ENST00000615125 194 ntBASIC21.94■■□□□ 1.1
CCDC116Q8IYX3 AC074183.2-201ENST00000623112 922 ntBASIC21.94■■□□□ 1.1
CCDC116Q8IYX3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC116Q8IYX3 HLA-L-211ENST00000482052 1765 ntBASIC21.94■■□□□ 1.1
CCDC116Q8IYX3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.94■■□□□ 1.1
CCDC116Q8IYX3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC116Q8IYX3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC116Q8IYX3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC116Q8IYX3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CCDC116Q8IYX3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC116Q8IYX3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC116Q8IYX3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC116Q8IYX3 AC090877.2-201ENST00000558441 1738 ntBASIC21.93■■□□□ 1.1
CCDC116Q8IYX3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC116Q8IYX3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC116Q8IYX3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC116Q8IYX3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC116Q8IYX3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC116Q8IYX3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC116Q8IYX3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC116Q8IYX3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC116Q8IYX3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC116Q8IYX3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC116Q8IYX3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC116Q8IYX3 LINC00543-201ENST00000567234 1845 ntBASIC21.89■■□□□ 1.09
CCDC116Q8IYX3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC116Q8IYX3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC116Q8IYX3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC116Q8IYX3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC116Q8IYX3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CCDC116Q8IYX3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC116Q8IYX3 AC022616.5-201ENST00000518796 181 ntBASIC21.88■■□□□ 1.09
CCDC116Q8IYX3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC116Q8IYX3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC116Q8IYX3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC116Q8IYX3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.87■■□□□ 1.09
CCDC116Q8IYX3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC116Q8IYX3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC116Q8IYX3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CCDC116Q8IYX3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
CCDC116Q8IYX3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC116Q8IYX3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms