Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00346Q8IVM7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.61■□□□□ 0.89
LINC00346Q8IVM7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00346Q8IVM7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00346Q8IVM7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00346Q8IVM7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LINC00346Q8IVM7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.6■□□□□ 0.89
LINC00346Q8IVM7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LINC00346Q8IVM7 MIR6765-201ENST00000614092 87 ntBASIC20.6■□□□□ 0.89
LINC00346Q8IVM7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00346Q8IVM7 HLA-L-211ENST00000482052 1765 ntBASIC20.59■□□□□ 0.89
LINC00346Q8IVM7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC00346Q8IVM7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00346Q8IVM7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00346Q8IVM7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC00346Q8IVM7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00346Q8IVM7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.59■□□□□ 0.89
LINC00346Q8IVM7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00346Q8IVM7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00346Q8IVM7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00346Q8IVM7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00346Q8IVM7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00346Q8IVM7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00346Q8IVM7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00346Q8IVM7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC00346Q8IVM7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LINC00346Q8IVM7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LINC00346Q8IVM7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00346Q8IVM7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 AC141586.4-201ENST00000624558 1573 ntBASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 KRT18P60-201ENST00000312876 1297 ntBASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 AC129492.7-201ENST00000622992 756 ntBASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00346Q8IVM7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 AC087393.1-201ENST00000582896 145 ntBASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00346Q8IVM7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00346Q8IVM7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00346Q8IVM7 AC004812.2-201ENST00000611079 2094 ntBASIC20.54■□□□□ 0.88
LINC00346Q8IVM7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC00346Q8IVM7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00346Q8IVM7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.54■□□□□ 0.88
LINC00346Q8IVM7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LINC00346Q8IVM7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
LINC00346Q8IVM7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00346Q8IVM7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00346Q8IVM7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00346Q8IVM7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00346Q8IVM7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00346Q8IVM7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
LINC00346Q8IVM7 ABHD17AP5-201ENST00000580133 923 ntBASIC20.52■□□□□ 0.88
LINC00346Q8IVM7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00346Q8IVM7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00346Q8IVM7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00346Q8IVM7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LINC00346Q8IVM7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINC00346Q8IVM7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINC00346Q8IVM7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.51■□□□□ 0.87
LINC00346Q8IVM7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC00346Q8IVM7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00346Q8IVM7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.51■□□□□ 0.87
LINC00346Q8IVM7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC00346Q8IVM7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 ABCB10P4-201ENST00000566803 2184 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms