Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 SRSF7-209ENST00000446327 2453 ntTSL 2 BASIC11□□□□□ -0.652e-6■□□□□ 9.3
DDX42Q86XP3 SRSF7-208ENST00000443213 1903 ntTSL 510.96□□□□□ -0.652e-6■□□□□ 9.3
DDX42Q86XP3 SRSF7-205ENST00000425941 1944 ntTSL 510.35□□□□□ -0.752e-6■□□□□ 9.3
DDX42Q86XP3 SRSF7-204ENST00000425778 2857 ntTSL 29.44□□□□□ -0.92e-6■□□□□ 9.3
DDX42Q86XP3 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.96□□□□□ -1.142e-6■□□□□ 9.3
DDX42Q86XP3 ACTB-211ENST00000480301 657 ntTSL 1 (best)22.03■■□□□ 1.122e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-212ENST00000484841 1032 ntTSL 521.43■■□□□ 1.022e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-210ENST00000477812 820 ntTSL 220.77■□□□□ 0.922e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.632e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-207ENST00000462494 2245 ntTSL 518.42■□□□□ 0.542e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-205ENST00000432588 568 ntTSL 417.22■□□□□ 0.352e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-206ENST00000443528 569 ntTSL 416.51■□□□□ 0.232e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-202ENST00000414620 561 ntTSL 416.45■□□□□ 0.222e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-204ENST00000425660 1845 ntTSL 1 (best)15.88■□□□□ 0.132e-24■□□□□ 9.3
DDX42Q86XP3 ACTB-209ENST00000473257 556 ntTSL 311.86□□□□□ -0.512e-24■□□□□ 9.3
DDX42Q86XP3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.01■■□□□ 1.751e-8■□□□□ 9.2
DDX42Q86XP3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.716e-6■□□□□ 9.2
DDX42Q86XP3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.576e-6■□□□□ 9.2
DDX42Q86XP3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.556e-6■□□□□ 9.2
DDX42Q86XP3 AL355987.4-202ENST00000459985 1900 ntTSL 224.76■■□□□ 1.556e-6■□□□□ 9.2
DDX42Q86XP3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.551e-8■□□□□ 9.2
DDX42Q86XP3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.81■■□□□ 1.241e-8■□□□□ 9.2
DDX42Q86XP3 UBA1-206ENST00000442035 1054 ntTSL 522.37■■□□□ 1.176e-6■□□□□ 9.2
DDX42Q86XP3 RABL6-210ENST00000484471 2746 ntTSL 521.86■■□□□ 1.096e-6■□□□□ 9.2
DDX42Q86XP3 AC005726.2-203ENST00000584196 2103 ntTSL 220.6■□□□□ 0.896e-6■□□□□ 9.2
DDX42Q86XP3 GANAB-203ENST00000524437 671 ntTSL 220.44■□□□□ 0.866e-6■□□□□ 9.2
DDX42Q86XP3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.32■□□□□ 0.846e-6■□□□□ 9.2
DDX42Q86XP3 GIPR-203ENST00000585889 1414 ntTSL 1 (best)19.77■□□□□ 0.766e-6■□□□□ 9.2
DDX42Q86XP3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.756e-6■□□□□ 9.2
DDX42Q86XP3 RBM14-209ENST00000512283 567 ntTSL 419.42■□□□□ 0.71e-8■□□□□ 9.2
DDX42Q86XP3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.656e-6■□□□□ 9.2
DDX42Q86XP3 ATXN2L-210ENST00000562867 609 ntTSL 219.11■□□□□ 0.656e-6■□□□□ 9.2
DDX42Q86XP3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.05■□□□□ 0.646e-6■□□□□ 9.2
DDX42Q86XP3 BBC3-206ENST00000601438 1747 nt18.82■□□□□ 0.61e-8■□□□□ 9.2
DDX42Q86XP3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.44■□□□□ 0.541e-8■□□□□ 9.2
DDX42Q86XP3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.536e-6■□□□□ 9.2
DDX42Q86XP3 ATXN2L-223ENST00000568266 1294 ntTSL 518.15■□□□□ 0.56e-6■□□□□ 9.2
DDX42Q86XP3 UBA1-208ENST00000457753 809 ntTSL 518.11■□□□□ 0.496e-6■□□□□ 9.2
DDX42Q86XP3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.446e-6■□□□□ 9.2
DDX42Q86XP3 GTPBP2-203ENST00000419497 1394 ntTSL 216.59■□□□□ 0.252e-8■□□□□ 9.2
DDX42Q86XP3 GANAB-214ENST00000534613 737 ntTSL 516.56■□□□□ 0.246e-6■□□□□ 9.2
DDX42Q86XP3 GANAB-204ENST00000525994 390 ntTSL 416.3■□□□□ 0.26e-6■□□□□ 9.2
DDX42Q86XP3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.196e-6■□□□□ 9.2
DDX42Q86XP3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.22■□□□□ 0.192e-7■□□□□ 9.2
DDX42Q86XP3 CDK19-208ENST00000497709 1117 ntTSL 316.22■□□□□ 0.196e-6■□□□□ 9.2
DDX42Q86XP3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.176e-6■□□□□ 9.2
DDX42Q86XP3 SGK494-203ENST00000469832 602 ntTSL 316■□□□□ 0.156e-6■□□□□ 9.2
DDX42Q86XP3 ATXN2L-216ENST00000564656 552 ntTSL 415.75■□□□□ 0.116e-6■□□□□ 9.2
DDX42Q86XP3 CDK19-207ENST00000468997 1083 ntTSL 1 (best)15.32■□□□□ 0.046e-6■□□□□ 9.2
DDX42Q86XP3 UBA1-204ENST00000412206 1148 ntTSL 515.21■□□□□ 0.036e-6■□□□□ 9.2
DDX42Q86XP3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.026e-6■□□□□ 9.2
DDX42Q86XP3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.93□□□□□ -0.026e-6■□□□□ 9.2
DDX42Q86XP3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.71□□□□□ -0.066e-6■□□□□ 9.2
DDX42Q86XP3 UBA1-205ENST00000427561 671 ntTSL 514.57□□□□□ -0.086e-6■□□□□ 9.2
DDX42Q86XP3 PPP2R5C-227ENST00000557268 2013 ntTSL 214.51□□□□□ -0.092e-7■□□□□ 9.2
DDX42Q86XP3 SGK494-212ENST00000581199 866 ntTSL 1 (best)14.41□□□□□ -0.16e-6■□□□□ 9.2
DDX42Q86XP3 HMGN1-211ENST00000471260 615 ntTSL 314.32□□□□□ -0.122e-7■□□□□ 9.2
DDX42Q86XP3 GTPBP2-204ENST00000432918 1850 ntTSL 313.5□□□□□ -0.252e-8■□□□□ 9.2
DDX42Q86XP3 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC13.31□□□□□ -0.286e-6■□□□□ 9.2
DDX42Q86XP3 CDK19-205ENST00000460913 448 ntTSL 513.27□□□□□ -0.296e-6■□□□□ 9.2
DDX42Q86XP3 PPP2R5C-216ENST00000556086 279 ntTSL 512.88□□□□□ -0.352e-7■□□□□ 9.2
DDX42Q86XP3 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC12.81□□□□□ -0.362e-8■□□□□ 9.2
DDX42Q86XP3 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.366e-6■□□□□ 9.2
DDX42Q86XP3 SGK494-207ENST00000527863 598 ntTSL 212.74□□□□□ -0.376e-6■□□□□ 9.2
DDX42Q86XP3 HMGN1-213ENST00000482192 793 ntTSL 312.56□□□□□ -0.42e-7■□□□□ 9.2
DDX42Q86XP3 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC12.51□□□□□ -0.416e-6■□□□□ 9.2
DDX42Q86XP3 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.426e-6■□□□□ 9.2
DDX42Q86XP3 GANAB-213ENST00000534422 702 ntTSL 512.15□□□□□ -0.466e-6■□□□□ 9.2
DDX42Q86XP3 SGK494-201ENST00000301037 1233 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.476e-6■□□□□ 9.2
DDX42Q86XP3 SGK494-209ENST00000530121 581 ntTSL 312.08□□□□□ -0.486e-6■□□□□ 9.2
DDX42Q86XP3 PPP2R5C-209ENST00000553890 492 ntTSL 312.03□□□□□ -0.482e-7■□□□□ 9.2
DDX42Q86XP3 GTPBP2-208ENST00000476510 2816 ntTSL 511.85□□□□□ -0.512e-8■□□□□ 9.2
DDX42Q86XP3 SGK494-205ENST00000525510 559 ntTSL 411.81□□□□□ -0.526e-6■□□□□ 9.2
DDX42Q86XP3 SGK494-206ENST00000526073 571 ntTSL 411.73□□□□□ -0.536e-6■□□□□ 9.2
DDX42Q86XP3 COPA-201ENST00000241704 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.556e-6■□□□□ 9.2
DDX42Q86XP3 CDK19-204ENST00000457688 955 ntTSL 511.25□□□□□ -0.616e-6■□□□□ 9.2
DDX42Q86XP3 HMGN1-215ENST00000485550 745 ntTSL 511.17□□□□□ -0.622e-7■□□□□ 9.2
DDX42Q86XP3 TMEM267-206ENST00000512085 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.646e-6■□□□□ 9.2
DDX42Q86XP3 SARS-205ENST00000477544 694 ntTSL 210.95□□□□□ -0.666e-6■□□□□ 9.2
DDX42Q86XP3 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.676e-6■□□□□ 9.2
DDX42Q86XP3 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC10.8□□□□□ -0.682e-7■□□□□ 9.2
DDX42Q86XP3 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC10.37□□□□□ -0.756e-6■□□□□ 9.2
DDX42Q86XP3 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.766e-6■□□□□ 9.2
DDX42Q86XP3 GANAB-211ENST00000532402 3718 ntTSL 1 (best)10.24□□□□□ -0.776e-6■□□□□ 9.2
DDX42Q86XP3 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.796e-6■□□□□ 9.2
DDX42Q86XP3 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC9.94□□□□□ -0.822e-7■□□□□ 9.2
DDX42Q86XP3 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC9.75□□□□□ -0.852e-7■□□□□ 9.2
DDX42Q86XP3 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC9.71□□□□□ -0.856e-6■□□□□ 9.2
DDX42Q86XP3 TMEM267-204ENST00000510130 721 ntTSL 3 BASIC9.64□□□□□ -0.876e-6■□□□□ 9.2
DDX42Q86XP3 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.916e-6■□□□□ 9.2
DDX42Q86XP3 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC9.21□□□□□ -0.936e-6■□□□□ 9.2
DDX42Q86XP3 PPP2R5C-206ENST00000553554 564 ntTSL 59.02□□□□□ -0.972e-7■□□□□ 9.2
DDX42Q86XP3 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -16e-6■□□□□ 9.2
DDX42Q86XP3 MTF2-209ENST00000487263 863 ntTSL 38.81□□□□□ -16e-6■□□□□ 9.2
DDX42Q86XP3 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.066e-6■□□□□ 9.2
DDX42Q86XP3 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.35□□□□□ -1.076e-6■□□□□ 9.2
DDX42Q86XP3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.136e-6■□□□□ 9.2
DDX42Q86XP3 HNRNPK-208ENST00000481820 957 ntTSL 27.54□□□□□ -1.26e-6■□□□□ 9.2
DDX42Q86XP3 PPP2R5C-215ENST00000556068 3363 ntTSL 27.45□□□□□ -1.222e-7■□□□□ 9.2
DDX42Q86XP3 MTF2-205ENST00000471953 1937 ntTSL 27.02□□□□□ -1.296e-6■□□□□ 9.2
Retrieved 100 of 2,477 protein–RNA pairs in 282.3 ms