RNA–Protein interactions for RNA: ENST00000446327.6

SRSF7-209, Transcript of serine and arginine rich splicing factor 7, humanhuman

TSL 2 BASIC

Gene SRSF7, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF7-209ENST00000446327 NISCHQ9Y2I1 1504 aa22.56■■□□□ 1.2
SRSF7-209ENST00000446327 CCDC180Q9P1Z9 1646 aa19.43■□□□□ 0.7
SRSF7-209ENST00000446327 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
SRSF7-209ENST00000446327 ZCCHC6Q5VYS8 1495 aaKnown RBP18.93■□□□□ 0.62
SRSF7-209ENST00000446327 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
SRSF7-209ENST00000446327 ABCC9O60706 1549 aa18.68■□□□□ 0.58
SRSF7-209ENST00000446327 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
SRSF7-209ENST00000446327 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
SRSF7-209ENST00000446327 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.51
SRSF7-209ENST00000446327 SCRIBQ14160 1630 aa18.22■□□□□ 0.51
SRSF7-209ENST00000446327 NACADO15069 1562 aa18.14■□□□□ 0.49
SRSF7-209ENST00000446327 MYT1Q01538 1121 aa18.12■□□□□ 0.49
SRSF7-209ENST00000446327 MYO15BQ96JP2 1530 aa18.12■□□□□ 0.49
SRSF7-209ENST00000446327 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
SRSF7-209ENST00000446327 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.448e-6■□□□□ 8.9
SRSF7-209ENST00000446327 UNC13AQ9UPW8 1703 aa17.71■□□□□ 0.43
SRSF7-209ENST00000446327 CECR2Q9BXF3 1484 aa17.68■□□□□ 0.42
SRSF7-209ENST00000446327 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
SRSF7-209ENST00000446327 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
SRSF7-209ENST00000446327 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.4
SRSF7-209ENST00000446327 HRCP23327 699 aa17.49■□□□□ 0.39
SRSF7-209ENST00000446327 WIZO95785 1651 aa17.42■□□□□ 0.38
SRSF7-209ENST00000446327 TTBK1Q5TCY1 1321 aaPredicted RBP17.38■□□□□ 0.37
SRSF7-209ENST00000446327 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
SRSF7-209ENST00000446327 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
SRSF7-209ENST00000446327 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
SRSF7-209ENST00000446327 TOP2AP11388 1531 aaKnown RBP17.09■□□□□ 0.33
SRSF7-209ENST00000446327 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
SRSF7-209ENST00000446327 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
SRSF7-209ENST00000446327 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
SRSF7-209ENST00000446327 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
SRSF7-209ENST00000446327 EIF4G1Q04637 1599 aaKnown RBP17■□□□□ 0.31
SRSF7-209ENST00000446327 SMARCA2P51531 1590 aa16.99■□□□□ 0.31
SRSF7-209ENST00000446327 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
SRSF7-209ENST00000446327 PEG3Q9GZU2 1588 aa16.95■□□□□ 0.3
SRSF7-209ENST00000446327 PPARGC1BQ86YN6 1023 aaKnown RBP16.94■□□□□ 0.3
SRSF7-209ENST00000446327 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
SRSF7-209ENST00000446327 PRKCSHP14314 528 aaPredicted RBP16.9■□□□□ 0.3
SRSF7-209ENST00000446327 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
SRSF7-209ENST00000446327 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
SRSF7-209ENST00000446327 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
SRSF7-209ENST00000446327 NCAPD3P42695 1498 aa16.78■□□□□ 0.28
SRSF7-209ENST00000446327 CC2D2AQ9P2K1 1620 aa16.77■□□□□ 0.27
SRSF7-209ENST00000446327 HMGXB3Q12766 1538 aa16.71■□□□□ 0.27
SRSF7-209ENST00000446327 BCL11AQ9H165 835 aa16.69■□□□□ 0.26
SRSF7-209ENST00000446327 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
SRSF7-209ENST00000446327 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.258e-7■■□□□ 13.9
SRSF7-209ENST00000446327 SOGA1O94964 1423 aa16.54■□□□□ 0.24
SRSF7-209ENST00000446327 SYNJ1O43426 1573 aa16.52■□□□□ 0.24
SRSF7-209ENST00000446327 ERICH6Q7L0X2 663 aa16.51■□□□□ 0.23
SRSF7-209ENST00000446327 APLP2Q06481 763 aa16.5■□□□□ 0.23
SRSF7-209ENST00000446327 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
SRSF7-209ENST00000446327 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
SRSF7-209ENST00000446327 CFTRP13569 1480 aa16.48■□□□□ 0.23
SRSF7-209ENST00000446327 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.22
SRSF7-209ENST00000446327 NESP48681 1621 aa16.43■□□□□ 0.22
SRSF7-209ENST00000446327 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
SRSF7-209ENST00000446327 ACIN1Q9UKV3 1341 aaKnown RBP16.36■□□□□ 0.21
SRSF7-209ENST00000446327 CUX1P39880 1505 aa16.36■□□□□ 0.21
SRSF7-209ENST00000446327 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
SRSF7-209ENST00000446327 CENPBP07199 599 aaPredicted RBP16.34■□□□□ 0.21
SRSF7-209ENST00000446327 UBTFP17480 764 aaKnown RBP16.34■□□□□ 0.21
SRSF7-209ENST00000446327 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
SRSF7-209ENST00000446327 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
SRSF7-209ENST00000446327 RANGAP1P46060 587 aaPredicted RBP16.28■□□□□ 0.2
SRSF7-209ENST00000446327 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
SRSF7-209ENST00000446327 EEA1Q15075 1411 aa16.25■□□□□ 0.19
SRSF7-209ENST00000446327 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
SRSF7-209ENST00000446327 GTF3C3Q9Y5Q9 886 aa16.22■□□□□ 0.19
SRSF7-209ENST00000446327 TRIM26Q12899 539 aaPredicted RBP16.21■□□□□ 0.19
SRSF7-209ENST00000446327 FGD5Q6ZNL6 1462 aa16.18■□□□□ 0.18
SRSF7-209ENST00000446327 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
SRSF7-209ENST00000446327 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
SRSF7-209ENST00000446327 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
SRSF7-209ENST00000446327 RAPGEF2Q9Y4G8 1499 aa16.15■□□□□ 0.18
SRSF7-209ENST00000446327 CUX2O14529 1486 aa16.14■□□□□ 0.17
SRSF7-209ENST00000446327 CEP162Q5TB80 1403 aa16.14■□□□□ 0.17
SRSF7-209ENST00000446327 RAD54L2Q9Y4B4 1467 aa16.13■□□□□ 0.17
SRSF7-209ENST00000446327 KIF27Q86VH2 1401 aa16.13■□□□□ 0.17
SRSF7-209ENST00000446327 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
SRSF7-209ENST00000446327 TNIKQ9UKE5 1360 aa16.12■□□□□ 0.17
SRSF7-209ENST00000446327 ZEB1P37275 1124 aaPredicted RBP16.12■□□□□ 0.17
SRSF7-209ENST00000446327 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
SRSF7-209ENST00000446327 KIF21AQ7Z4S6 1674 aa16.12■□□□□ 0.17
SRSF7-209ENST00000446327 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
SRSF7-209ENST00000446327 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
SRSF7-209ENST00000446327 POLA1P09884 1462 aaPredicted RBP16.07■□□□□ 0.16
SRSF7-209ENST00000446327 KIF21BO75037 1637 aa16.06■□□□□ 0.16
SRSF7-209ENST00000446327 IGF1RP08069 1367 aa16.02■□□□□ 0.16
SRSF7-209ENST00000446327 ANP32EQ9BTT0 268 aa16.02■□□□□ 0.16
SRSF7-209ENST00000446327 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
SRSF7-209ENST00000446327 PRXQ9BXM0 1461 aa16■□□□□ 0.15
SRSF7-209ENST00000446327 CLIP1P30622 1438 aa15.98■□□□□ 0.15
SRSF7-209ENST00000446327 ERCC6Q03468 1493 aa15.96■□□□□ 0.15
SRSF7-209ENST00000446327 CARMIL1Q5VZK9 1371 aa15.96■□□□□ 0.15
SRSF7-209ENST00000446327 SLC24A1O60721 1099 aa15.94■□□□□ 0.14
SRSF7-209ENST00000446327 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
SRSF7-209ENST00000446327 MRC2Q9UBG0 1479 aa15.92■□□□□ 0.14
SRSF7-209ENST00000446327 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
SRSF7-209ENST00000446327 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms