Protein–RNA interactions for Protein: Q15078

CDK5R1, Cyclin-dependent kinase 5 activator 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1Q15078 AC079834.2-201ENST00000609776 1949 ntBASIC20.53■□□□□ 0.88
CDK5R1Q15078 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5R1Q15078 AC060814.1-201ENST00000554326 538 ntBASIC20.53■□□□□ 0.88
CDK5R1Q15078 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CDK5R1Q15078 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5R1Q15078 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5R1Q15078 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CDK5R1Q15078 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5R1Q15078 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.53■□□□□ 0.88
CDK5R1Q15078 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5R1Q15078 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDK5R1Q15078 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5R1Q15078 SMPD5-203ENST00000639008 1464 ntBASIC20.52■□□□□ 0.88
CDK5R1Q15078 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5R1Q15078 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.52■□□□□ 0.88
CDK5R1Q15078 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5R1Q15078 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5R1Q15078 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CDK5R1Q15078 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.52■□□□□ 0.87
CDK5R1Q15078 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5R1Q15078 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDK5R1Q15078 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5R1Q15078 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5R1Q15078 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5R1Q15078 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5R1Q15078 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5R1Q15078 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5R1Q15078 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK5R1Q15078 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5R1Q15078 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5R1Q15078 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5R1Q15078 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK5R1Q15078 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5R1Q15078 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK5R1Q15078 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5R1Q15078 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5R1Q15078 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK5R1Q15078 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5R1Q15078 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5R1Q15078 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5R1Q15078 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5R1Q15078 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5R1Q15078 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5R1Q15078 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CDK5R1Q15078 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.49■□□□□ 0.87
CDK5R1Q15078 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5R1Q15078 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5R1Q15078 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5R1Q15078 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5R1Q15078 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.48■□□□□ 0.87
CDK5R1Q15078 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5R1Q15078 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5R1Q15078 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5R1Q15078 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5R1Q15078 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5R1Q15078 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.48■□□□□ 0.87
CDK5R1Q15078 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5R1Q15078 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CDK5R1Q15078 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5R1Q15078 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5R1Q15078 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5R1Q15078 MIR7108-201ENST00000614319 87 ntBASIC20.47■□□□□ 0.87
CDK5R1Q15078 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5R1Q15078 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5R1Q15078 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK5R1Q15078 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5R1Q15078 C9orf163-202ENST00000624034 2573 ntBASIC20.46■□□□□ 0.87
CDK5R1Q15078 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5R1Q15078 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5R1Q15078 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDK5R1Q15078 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.46■□□□□ 0.87
CDK5R1Q15078 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDK5R1Q15078 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK5R1Q15078 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CDK5R1Q15078 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
CDK5R1Q15078 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5R1Q15078 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.45■□□□□ 0.86
CDK5R1Q15078 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CDK5R1Q15078 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5R1Q15078 AC092296.2-201ENST00000589470 999 ntBASIC20.45■□□□□ 0.86
CDK5R1Q15078 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.45■□□□□ 0.86
CDK5R1Q15078 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
CDK5R1Q15078 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5R1Q15078 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDK5R1Q15078 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5R1Q15078 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5R1Q15078 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5R1Q15078 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5R1Q15078 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CDK5R1Q15078 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5R1Q15078 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5R1Q15078 FOXO3B-201ENST00000395675 1928 ntBASIC20.44■□□□□ 0.86
CDK5R1Q15078 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5R1Q15078 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK5R1Q15078 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CDK5R1Q15078 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CDK5R1Q15078 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.43■□□□□ 0.86
CDK5R1Q15078 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.43■□□□□ 0.86
CDK5R1Q15078 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.43■□□□□ 0.86
CDK5R1Q15078 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms