Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HDAC6Q9UBN7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 TMEM14DP-201ENST00000422205 345 ntBASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 RRP7BP-205ENST00000566851 833 ntBASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC6Q9UBN7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 CDC14C-201ENST00000428251 1719 ntBASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 RARRES2P5-201ENST00000564013 466 ntBASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 TMEM261P1-201ENST00000604899 340 ntBASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 CLK3P2-201ENST00000427566 1453 ntBASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC6Q9UBN7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 MIR658-201ENST00000385210 100 ntBASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms