RNA–Protein interactions for RNA: ENST00000591600.1

APOC4-201, Transcript of apolipoprotein C4, humanhuman

TSL 3 BASIC

Gene APOC4, Length 348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-201ENST00000591600 NISCHQ9Y2I1 1504 aa38.6■■■■□ 3.77
APOC4-201ENST00000591600 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
APOC4-201ENST00000591600 ABCC9O60706 1549 aa34.53■■■■□ 3.12
APOC4-201ENST00000591600 RB1CC1Q8TDY2 1594 aa32.98■■■□□ 2.87
APOC4-201ENST00000591600 NACADO15069 1562 aa32.79■■■□□ 2.84
APOC4-201ENST00000591600 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
APOC4-201ENST00000591600 MYO15BQ96JP2 1530 aa32.39■■■□□ 2.78
APOC4-201ENST00000591600 DNAJC5BQ9UF47 199 aa32.38■■■□□ 2.77
APOC4-201ENST00000591600 UNC13AQ9UPW8 1703 aa32.3■■■□□ 2.76
APOC4-201ENST00000591600 PABPN1Q86U42 306 aaKnown RBP eCLIP32.11■■■□□ 2.73
APOC4-201ENST00000591600 BICRAQ9NZM4 1560 aa32.01■■■□□ 2.71
APOC4-201ENST00000591600 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
APOC4-201ENST00000591600 DCAF1Q9Y4B6 1507 aa31.96■■■□□ 2.71
APOC4-201ENST00000591600 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
APOC4-201ENST00000591600 SCRIBQ14160 1630 aa31.49■■■□□ 2.63
APOC4-201ENST00000591600 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
APOC4-201ENST00000591600 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
APOC4-201ENST00000591600 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.57
APOC4-201ENST00000591600 NCAPD3P42695 1498 aa30.25■■■□□ 2.43
APOC4-201ENST00000591600 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
APOC4-201ENST00000591600 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
APOC4-201ENST00000591600 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
APOC4-201ENST00000591600 HMGXB3Q12766 1538 aa30.03■■■□□ 2.4
APOC4-201ENST00000591600 BAZ1AQ9NRL2 1556 aaPredicted RBP29.98■■■□□ 2.39
APOC4-201ENST00000591600 PEG3Q9GZU2 1588 aa29.89■■■□□ 2.38
APOC4-201ENST00000591600 CUX2O14529 1486 aa29.84■■■□□ 2.37
APOC4-201ENST00000591600 ERCC6Q03468 1493 aa29.82■■■□□ 2.36
APOC4-201ENST00000591600 BAZ1BQ9UIG0 1483 aaKnown RBP29.81■■■□□ 2.36
APOC4-201ENST00000591600 DNAJC5Q9H3Z4 198 aa29.78■■■□□ 2.36
APOC4-201ENST00000591600 MROH2BQ7Z745 1585 aa29.71■■■□□ 2.35
APOC4-201ENST00000591600 NESP48681 1621 aa29.68■■■□□ 2.34
APOC4-201ENST00000591600 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
APOC4-201ENST00000591600 THOC2Q8NI27 1593 aaKnown RBP29.44■■■□□ 2.3
APOC4-201ENST00000591600 WIZO95785 1651 aa29.37■■■□□ 2.29
APOC4-201ENST00000591600 KIF21AQ7Z4S6 1674 aa29.37■■■□□ 2.29
APOC4-201ENST00000591600 PDS5BQ9NTI5 1447 aa29.36■■■□□ 2.29
APOC4-201ENST00000591600 CADPSQ9ULU8 1353 aa29.29■■■□□ 2.28
APOC4-201ENST00000591600 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
APOC4-201ENST00000591600 MRC2Q9UBG0 1479 aa29.09■■■□□ 2.25
APOC4-201ENST00000591600 WDR62O43379 1518 aa29.05■■■□□ 2.24
APOC4-201ENST00000591600 TOP2AP11388 1531 aaKnown RBP29.01■■■□□ 2.23
APOC4-201ENST00000591600 CFTRP13569 1480 aa28.98■■■□□ 2.23
APOC4-201ENST00000591600 CEP164Q9UPV0 1460 aa28.97■■■□□ 2.23
APOC4-201ENST00000591600 FANCD2Q9BXW9 1451 aa28.94■■■□□ 2.22
APOC4-201ENST00000591600 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
APOC4-201ENST00000591600 URB2Q14146 1524 aaKnown RBP28.7■■■□□ 2.19
APOC4-201ENST00000591600 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
APOC4-201ENST00000591600 OSCARQ8IYS5 282 aa28.45■■■□□ 2.14
APOC4-201ENST00000591600 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
APOC4-201ENST00000591600 TOPBP1Q92547 1522 aa28.41■■■□□ 2.14
APOC4-201ENST00000591600 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
APOC4-201ENST00000591600 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
APOC4-201ENST00000591600 DNMBPQ6XZF7 1577 aa28.33■■■□□ 2.12
APOC4-201ENST00000591600 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
APOC4-201ENST00000591600 EIF4G3O43432 1585 aaKnown RBP28.21■■■□□ 2.11
APOC4-201ENST00000591600 TARBP1Q13395 1621 aaKnown RBP28.2■■■□□ 2.1
APOC4-201ENST00000591600 POLA1P09884 1462 aaPredicted RBP28.11■■■□□ 2.09
APOC4-201ENST00000591600 RIMBP3CA6NJZ7 1639 aa28.09■■■□□ 2.09
APOC4-201ENST00000591600 RIMBP3BA6NNM3 1639 aa28.09■■■□□ 2.09
APOC4-201ENST00000591600 RIMBP3Q9UFD9 1639 aa28.09■■■□□ 2.09
APOC4-201ENST00000591600 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.08
APOC4-201ENST00000591600 CHD1O14646 1710 aa28.03■■■□□ 2.08
APOC4-201ENST00000591600 ARHGEF11O15085 1522 aa27.99■■■□□ 2.07
APOC4-201ENST00000591600 SOGA1O94964 1423 aa27.98■■■□□ 2.07
APOC4-201ENST00000591600 WDR97A6NE52 1622 aa27.97■■■□□ 2.07
APOC4-201ENST00000591600 RAD54L2Q9Y4B4 1467 aa27.96■■■□□ 2.07
APOC4-201ENST00000591600 FGD5Q6ZNL6 1462 aa27.93■■■□□ 2.06
APOC4-201ENST00000591600 CUX1P39880 1505 aa27.91■■■□□ 2.06
APOC4-201ENST00000591600 TDRD9Q8NDG6 1382 aaKnown RBP27.88■■■□□ 2.05
APOC4-201ENST00000591600 FBLN2P98095 1184 aa27.82■■■□□ 2.04
APOC4-201ENST00000591600 SNAPC4Q5SXM2 1469 aa27.78■■■□□ 2.04
APOC4-201ENST00000591600 MAGI1Q96QZ7 1491 aaPredicted RBP27.77■■■□□ 2.04
APOC4-201ENST00000591600 GRIN2BQ13224 1484 aa27.75■■■□□ 2.03
APOC4-201ENST00000591600 CYB5RLQ6IPT4 315 aa27.73■■■□□ 2.03
APOC4-201ENST00000591600 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
APOC4-201ENST00000591600 ARAP1Q96P48 1450 aa27.7■■■□□ 2.02
APOC4-201ENST00000591600 CLASP1Q7Z460 1538 aa27.69■■■□□ 2.02
APOC4-201ENST00000591600 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
APOC4-201ENST00000591600 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
APOC4-201ENST00000591600 CHMP7Q8WUX9 453 aaPredicted RBP27.67■■■□□ 2.02
APOC4-201ENST00000591600 SYNJ2O15056 1496 aa27.67■■■□□ 2.02
APOC4-201ENST00000591600 ABCA10Q8WWZ4 1543 aa27.65■■■□□ 2.02
APOC4-201ENST00000591600 GAPVD1Q14C86 1478 aa27.64■■■□□ 2.02
APOC4-201ENST00000591600 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
APOC4-201ENST00000591600 BIVM-ERCC5R4GMW8 1640 aa27.54■■■□□ 2
APOC4-201ENST00000591600 TOP2BQ02880 1626 aa27.52■■■□□ 2
APOC4-201ENST00000591600 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
APOC4-201ENST00000591600 GRIN2AQ12879 1464 aa27.39■■□□□ 1.98
APOC4-201ENST00000591600 TRHP20396 242 aaPredicted RBP27.38■■□□□ 1.97
APOC4-201ENST00000591600 ADAMTS12P58397 1594 aa27.38■■□□□ 1.97
APOC4-201ENST00000591600 ERICH3Q5RHP9 1530 aa27.32■■□□□ 1.96
APOC4-201ENST00000591600 NUP160Q12769 1436 aa27.32■■□□□ 1.96
APOC4-201ENST00000591600 FHAD1B1AJZ9 1412 aa27.3■■□□□ 1.96
APOC4-201ENST00000591600 CEP170Q5SW79 1584 aa27.29■■□□□ 1.96
APOC4-201ENST00000591600 SHROOM2Q13796 1616 aa27.24■■□□□ 1.95
APOC4-201ENST00000591600 ERCC6L2Q5T890 1561 aa27.21■■□□□ 1.95
APOC4-201ENST00000591600 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
APOC4-201ENST00000591600 JPH4Q96JJ6 628 aa27.01■■□□□ 1.91
APOC4-201ENST00000591600 PRG4Q92954 1404 aaPredicted RBP27■■□□□ 1.91
APOC4-201ENST00000591600 CUL7Q14999 1698 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms