RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 NISCHQ9Y2I1 1504 aa38.62■■■■□ 3.77
CLCN6-207ENST00000376497 ABCC9O60706 1549 aa34.76■■■■□ 3.16
CLCN6-207ENST00000376497 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
CLCN6-207ENST00000376497 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
CLCN6-207ENST00000376497 NACADO15069 1562 aa32.85■■■□□ 2.85
CLCN6-207ENST00000376497 DNAJC5BQ9UF47 199 aa32.73■■■□□ 2.83
CLCN6-207ENST00000376497 DCAF8L2P0C7V8 631 aa32.57■■■□□ 2.8
CLCN6-207ENST00000376497 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
CLCN6-207ENST00000376497 MYO15BQ96JP2 1530 aa32.39■■■□□ 2.78
CLCN6-207ENST00000376497 PABPN1Q86U42 306 aaKnown RBP eCLIP32.33■■■□□ 2.77
CLCN6-207ENST00000376497 BICRAQ9NZM4 1560 aa32.14■■■□□ 2.74
CLCN6-207ENST00000376497 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
CLCN6-207ENST00000376497 DCAF1Q9Y4B6 1507 aa31.93■■■□□ 2.7
CLCN6-207ENST00000376497 SHROOM4Q9ULL8 1493 aa31.71■■■□□ 2.67
CLCN6-207ENST00000376497 SCRIBQ14160 1630 aa31.57■■■□□ 2.64
CLCN6-207ENST00000376497 CC2D2AQ9P2K1 1620 aa31.44■■■□□ 2.62
CLCN6-207ENST00000376497 EIF4G1Q04637 1599 aaKnown RBP31.34■■■□□ 2.61
CLCN6-207ENST00000376497 CECR2Q9BXF3 1484 aa31.34■■■□□ 2.61
CLCN6-207ENST00000376497 NCAPD3P42695 1498 aa30.32■■■□□ 2.44
CLCN6-207ENST00000376497 ATAD2BQ9ULI0 1458 aa30.2■■■□□ 2.43
CLCN6-207ENST00000376497 DNAJC5Q9H3Z4 198 aa30.15■■■□□ 2.42
CLCN6-207ENST00000376497 SMARCA4P51532 1647 aa30.14■■■□□ 2.42
CLCN6-207ENST00000376497 SMARCA2P51531 1590 aa30.11■■■□□ 2.41
CLCN6-207ENST00000376497 HMGXB3Q12766 1538 aa30.09■■■□□ 2.41
CLCN6-207ENST00000376497 CUX2O14529 1486 aa30.05■■■□□ 2.4
CLCN6-207ENST00000376497 ERCC6Q03468 1493 aa30■■■□□ 2.39
CLCN6-207ENST00000376497 BAZ1AQ9NRL2 1556 aaPredicted RBP29.98■■■□□ 2.39
CLCN6-207ENST00000376497 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
CLCN6-207ENST00000376497 BAZ1BQ9UIG0 1483 aaKnown RBP29.88■■■□□ 2.37
CLCN6-207ENST00000376497 NESP48681 1621 aa29.84■■■□□ 2.37
CLCN6-207ENST00000376497 MROH2BQ7Z745 1585 aa29.73■■■□□ 2.35
CLCN6-207ENST00000376497 LAMC3Q9Y6N6 1575 aa29.67■■■□□ 2.34
CLCN6-207ENST00000376497 THOC2Q8NI27 1593 aaKnown RBP29.6■■■□□ 2.33
CLCN6-207ENST00000376497 KIF21AQ7Z4S6 1674 aa29.5■■■□□ 2.31
CLCN6-207ENST00000376497 PDS5BQ9NTI5 1447 aa29.47■■■□□ 2.31
CLCN6-207ENST00000376497 WIZO95785 1651 aa29.4■■■□□ 2.3
CLCN6-207ENST00000376497 CADPSQ9ULU8 1353 aa29.39■■■□□ 2.29
CLCN6-207ENST00000376497 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
CLCN6-207ENST00000376497 WDR62O43379 1518 aa29.16■■■□□ 2.26
CLCN6-207ENST00000376497 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
CLCN6-207ENST00000376497 CEP164Q9UPV0 1460 aa29.07■■■□□ 2.24
CLCN6-207ENST00000376497 CFTRP13569 1480 aa29.04■■■□□ 2.24
CLCN6-207ENST00000376497 FANCD2Q9BXW9 1451 aa29.04■■■□□ 2.24
CLCN6-207ENST00000376497 TOP2AP11388 1531 aaKnown RBP29■■■□□ 2.23
CLCN6-207ENST00000376497 URB2Q14146 1524 aaKnown RBP28.8■■■□□ 2.2
CLCN6-207ENST00000376497 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
CLCN6-207ENST00000376497 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
CLCN6-207ENST00000376497 CCDC88BA6NC98 1476 aa28.68■■■□□ 2.18
CLCN6-207ENST00000376497 OSCARQ8IYS5 282 aa28.64■■■□□ 2.18
CLCN6-207ENST00000376497 IFT140Q96RY7 1462 aa28.51■■■□□ 2.15
CLCN6-207ENST00000376497 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
CLCN6-207ENST00000376497 ZNF608Q9ULD9 1512 aaPredicted RBP28.45■■■□□ 2.15
CLCN6-207ENST00000376497 ABCC8Q09428 1581 aa28.45■■■□□ 2.14
CLCN6-207ENST00000376497 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
CLCN6-207ENST00000376497 EIF4G3O43432 1585 aaKnown RBP28.31■■■□□ 2.12
CLCN6-207ENST00000376497 RIMBP3CA6NJZ7 1639 aa28.29■■■□□ 2.12
CLCN6-207ENST00000376497 RIMBP3BA6NNM3 1639 aa28.29■■■□□ 2.12
CLCN6-207ENST00000376497 RIMBP3Q9UFD9 1639 aa28.29■■■□□ 2.12
CLCN6-207ENST00000376497 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
CLCN6-207ENST00000376497 AQRO60306 1485 aaKnown RBP eCLIP28.19■■■□□ 2.13e-7■■■■■ 39.5
CLCN6-207ENST00000376497 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
CLCN6-207ENST00000376497 POLA1P09884 1462 aaPredicted RBP28.18■■■□□ 2.1
CLCN6-207ENST00000376497 CHD1O14646 1710 aa28.15■■■□□ 2.1
CLCN6-207ENST00000376497 RAD54L2Q9Y4B4 1467 aa28.07■■■□□ 2.08
CLCN6-207ENST00000376497 SOGA1O94964 1423 aa28.05■■■□□ 2.08
CLCN6-207ENST00000376497 WDR97A6NE52 1622 aa27.99■■■□□ 2.07
CLCN6-207ENST00000376497 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
CLCN6-207ENST00000376497 FGD5Q6ZNL6 1462 aa27.98■■■□□ 2.07
CLCN6-207ENST00000376497 FBLN2P98095 1184 aa27.98■■■□□ 2.07
CLCN6-207ENST00000376497 CYB5RLQ6IPT4 315 aa27.96■■■□□ 2.07
CLCN6-207ENST00000376497 CUX1P39880 1505 aa27.94■■■□□ 2.06
CLCN6-207ENST00000376497 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.06
CLCN6-207ENST00000376497 ARAP1Q96P48 1450 aa27.89■■■□□ 2.06
CLCN6-207ENST00000376497 MAGI1Q96QZ7 1491 aaPredicted RBP27.83■■■□□ 2.05
CLCN6-207ENST00000376497 GRIN2BQ13224 1484 aa27.82■■■□□ 2.04
CLCN6-207ENST00000376497 CLASP1Q7Z460 1538 aa27.81■■■□□ 2.04
CLCN6-207ENST00000376497 CHMP7Q8WUX9 453 aaPredicted RBP27.79■■■□□ 2.04
CLCN6-207ENST00000376497 SYNJ1O43426 1573 aa27.78■■■□□ 2.04
CLCN6-207ENST00000376497 SYNJ2O15056 1496 aa27.74■■■□□ 2.03
CLCN6-207ENST00000376497 PBRM1Q86U86 1689 aa27.74■■■□□ 2.03
CLCN6-207ENST00000376497 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.03
CLCN6-207ENST00000376497 ABCA10Q8WWZ4 1543 aa27.68■■■□□ 2.02
CLCN6-207ENST00000376497 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
CLCN6-207ENST00000376497 TRHP20396 242 aaPredicted RBP27.66■■■□□ 2.02
CLCN6-207ENST00000376497 ABCA5Q8WWZ7 1642 aa27.65■■■□□ 2.02
CLCN6-207ENST00000376497 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 25e-6■■■■■ 46
CLCN6-207ENST00000376497 BIVM-ERCC5R4GMW8 1640 aa27.51■■□□□ 1.99
CLCN6-207ENST00000376497 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
CLCN6-207ENST00000376497 GRIN2AQ12879 1464 aa27.46■■□□□ 1.99
CLCN6-207ENST00000376497 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
CLCN6-207ENST00000376497 NUP160Q12769 1436 aa27.39■■□□□ 1.97
CLCN6-207ENST00000376497 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
CLCN6-207ENST00000376497 FHAD1B1AJZ9 1412 aa27.35■■□□□ 1.97
CLCN6-207ENST00000376497 ERCC6L2Q5T890 1561 aa27.35■■□□□ 1.97
CLCN6-207ENST00000376497 ERICH3Q5RHP9 1530 aa27.34■■□□□ 1.97
CLCN6-207ENST00000376497 SHROOM2Q13796 1616 aa27.3■■□□□ 1.96
CLCN6-207ENST00000376497 PRG4Q92954 1404 aaPredicted RBP27.1■■□□□ 1.93
CLCN6-207ENST00000376497 JPH4Q96JJ6 628 aa27.1■■□□□ 1.93
CLCN6-207ENST00000376497 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
CLCN6-207ENST00000376497 KIF13AQ9H1H9 1805 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms