Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 BASP1P1-201ENST00000430708 665 ntBASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 POU5F1P6-201ENST00000466990 990 ntBASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHMP1BQ7LBR1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 AL035456.1-201ENST00000456064 1369 ntBASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 AC093214.1-201ENST00000511688 1107 ntBASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 AC026979.3-201ENST00000607315 403 ntBASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 AL589702.1-201ENST00000641229 1509 ntBASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHMP1BQ7LBR1 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CHMP1BQ7LBR1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.64□□□□□ -0.07
CHMP1BQ7LBR1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms