Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.9□□□□□ -0.18
ATF1P18846 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.9□□□□□ -0.18
ATF1P18846 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ATF1P18846 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.9□□□□□ -0.18
ATF1P18846 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.9□□□□□ -0.18
ATF1P18846 AJ011931.1-201ENST00000618749 2492 ntBASIC13.9□□□□□ -0.18
ATF1P18846 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.9□□□□□ -0.18
ATF1P18846 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ATF1P18846 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.9□□□□□ -0.18
ATF1P18846 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
ATF1P18846 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.9□□□□□ -0.19
ATF1P18846 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.89□□□□□ -0.19
ATF1P18846 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
ATF1P18846 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ATF1P18846 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ATF1P18846 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ATF1P18846 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 GPX1P2-201ENST00000429271 606 ntBASIC13.89□□□□□ -0.19
ATF1P18846 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 KRT18P2-201ENST00000447938 1258 ntBASIC13.89□□□□□ -0.19
ATF1P18846 AC009078.2-202ENST00000463353 338 ntBASIC13.89□□□□□ -0.19
ATF1P18846 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
ATF1P18846 AC068137.2-201ENST00000605408 478 ntBASIC13.89□□□□□ -0.19
ATF1P18846 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.89□□□□□ -0.19
ATF1P18846 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.89□□□□□ -0.19
ATF1P18846 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.89□□□□□ -0.19
ATF1P18846 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.89□□□□□ -0.19
ATF1P18846 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.89□□□□□ -0.19
ATF1P18846 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.89□□□□□ -0.19
ATF1P18846 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ATF1P18846 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.88□□□□□ -0.19
ATF1P18846 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ATF1P18846 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.88□□□□□ -0.19
ATF1P18846 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.88□□□□□ -0.19
ATF1P18846 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ATF1P18846 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms