RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
SNCAIP-207ENST00000504884 CCDC180Q9P1Z9 1646 aa28.89■■■□□ 2.21
SNCAIP-207ENST00000504884 ZCCHC6Q5VYS8 1495 aaKnown RBP28.24■■■□□ 2.11
SNCAIP-207ENST00000504884 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
SNCAIP-207ENST00000504884 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.03
SNCAIP-207ENST00000504884 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
SNCAIP-207ENST00000504884 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
SNCAIP-207ENST00000504884 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
SNCAIP-207ENST00000504884 ABCC9O60706 1549 aa26.97■■□□□ 1.91
SNCAIP-207ENST00000504884 NACADO15069 1562 aa26.85■■□□□ 1.89
SNCAIP-207ENST00000504884 SCRIBQ14160 1630 aa26.71■■□□□ 1.87
SNCAIP-207ENST00000504884 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
SNCAIP-207ENST00000504884 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
SNCAIP-207ENST00000504884 CHIC1Q5VXU3 224 aa26.19■■□□□ 1.78
SNCAIP-207ENST00000504884 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
SNCAIP-207ENST00000504884 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
SNCAIP-207ENST00000504884 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
SNCAIP-207ENST00000504884 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
SNCAIP-207ENST00000504884 WIZO95785 1651 aa25.73■■□□□ 1.71
SNCAIP-207ENST00000504884 BICRAQ9NZM4 1560 aa25.67■■□□□ 1.7
SNCAIP-207ENST00000504884 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
SNCAIP-207ENST00000504884 SMARCA4P51532 1647 aa25.62■■□□□ 1.69
SNCAIP-207ENST00000504884 TOP2AP11388 1531 aaKnown RBP25.45■■□□□ 1.67
SNCAIP-207ENST00000504884 TRIM41Q8WV44 630 aa25.43■■□□□ 1.66
SNCAIP-207ENST00000504884 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
SNCAIP-207ENST00000504884 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
SNCAIP-207ENST00000504884 LOC105371045A0A1W2PR82 267 aa25.26■■□□□ 1.63
SNCAIP-207ENST00000504884 SMARCA2P51531 1590 aa25.24■■□□□ 1.63
SNCAIP-207ENST00000504884 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.62
SNCAIP-207ENST00000504884 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
SNCAIP-207ENST00000504884 BAZ1BQ9UIG0 1483 aaKnown RBP25■■□□□ 1.59
SNCAIP-207ENST00000504884 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
SNCAIP-207ENST00000504884 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
SNCAIP-207ENST00000504884 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
SNCAIP-207ENST00000504884 HMGXB3Q12766 1538 aa24.76■■□□□ 1.56
SNCAIP-207ENST00000504884 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
SNCAIP-207ENST00000504884 PCGF6Q9BYE7 350 aa24.67■■□□□ 1.54
SNCAIP-207ENST00000504884 EHMT2Q96KQ7 1210 aa24.63■■□□□ 1.53
SNCAIP-207ENST00000504884 EEA1Q15075 1411 aa24.62■■□□□ 1.53
SNCAIP-207ENST00000504884 SOGA1O94964 1423 aa24.58■■□□□ 1.53
SNCAIP-207ENST00000504884 TRIM26Q12899 539 aaPredicted RBP24.53■■□□□ 1.52
SNCAIP-207ENST00000504884 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
SNCAIP-207ENST00000504884 SYNJ1O43426 1573 aa24.51■■□□□ 1.51
SNCAIP-207ENST00000504884 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
SNCAIP-207ENST00000504884 CFTRP13569 1480 aa24.41■■□□□ 1.5
SNCAIP-207ENST00000504884 TOP2BQ02880 1626 aa24.37■■□□□ 1.49
SNCAIP-207ENST00000504884 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
SNCAIP-207ENST00000504884 HRCP23327 699 aa24.37■■□□□ 1.49
SNCAIP-207ENST00000504884 TNIKQ9UKE5 1360 aa24.36■■□□□ 1.49
SNCAIP-207ENST00000504884 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
SNCAIP-207ENST00000504884 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
SNCAIP-207ENST00000504884 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
SNCAIP-207ENST00000504884 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
SNCAIP-207ENST00000504884 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
SNCAIP-207ENST00000504884 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
SNCAIP-207ENST00000504884 KIF21BO75037 1637 aa24.21■■□□□ 1.47
SNCAIP-207ENST00000504884 CUX1P39880 1505 aa24.2■■□□□ 1.46
SNCAIP-207ENST00000504884 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
SNCAIP-207ENST00000504884 KIF27Q86VH2 1401 aa24.04■■□□□ 1.44
SNCAIP-207ENST00000504884 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
SNCAIP-207ENST00000504884 PPARGC1BQ86YN6 1023 aaKnown RBP24.02■■□□□ 1.44
SNCAIP-207ENST00000504884 PRXQ9BXM0 1461 aa23.98■■□□□ 1.43
SNCAIP-207ENST00000504884 ERICH3Q5RHP9 1530 aa23.96■■□□□ 1.43
SNCAIP-207ENST00000504884 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
SNCAIP-207ENST00000504884 CLIP1P30622 1438 aa23.95■■□□□ 1.43
SNCAIP-207ENST00000504884 FGD5Q6ZNL6 1462 aa23.86■■□□□ 1.41
SNCAIP-207ENST00000504884 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
SNCAIP-207ENST00000504884 ZEB1P37275 1124 aaPredicted RBP23.84■■□□□ 1.41
SNCAIP-207ENST00000504884 NESP48681 1621 aa23.84■■□□□ 1.41
SNCAIP-207ENST00000504884 CUX2O14529 1486 aa23.84■■□□□ 1.41
SNCAIP-207ENST00000504884 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
SNCAIP-207ENST00000504884 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
SNCAIP-207ENST00000504884 IGF1RP08069 1367 aa23.79■■□□□ 1.4
SNCAIP-207ENST00000504884 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
SNCAIP-207ENST00000504884 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
SNCAIP-207ENST00000504884 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
SNCAIP-207ENST00000504884 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.38
SNCAIP-207ENST00000504884 APLP2Q06481 763 aa23.7■■□□□ 1.38
SNCAIP-207ENST00000504884 DNAJC5BQ9UF47 199 aa23.7■■□□□ 1.38
SNCAIP-207ENST00000504884 CARMIL1Q5VZK9 1371 aa23.68■■□□□ 1.38
SNCAIP-207ENST00000504884 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
SNCAIP-207ENST00000504884 ABCA10Q8WWZ4 1543 aa23.66■■□□□ 1.38
SNCAIP-207ENST00000504884 RAD54L2Q9Y4B4 1467 aa23.63■■□□□ 1.37
SNCAIP-207ENST00000504884 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
SNCAIP-207ENST00000504884 URB2Q14146 1524 aaKnown RBP23.61■■□□□ 1.37
SNCAIP-207ENST00000504884 ARHGAP35Q9NRY4 1499 aa23.52■■□□□ 1.36
SNCAIP-207ENST00000504884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.48■■□□□ 1.35
SNCAIP-207ENST00000504884 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
SNCAIP-207ENST00000504884 CCER1Q8TC90 406 aaPredicted RBP23.47■■□□□ 1.35
SNCAIP-207ENST00000504884 CUL7Q14999 1698 aa23.45■■□□□ 1.34
SNCAIP-207ENST00000504884 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
SNCAIP-207ENST00000504884 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.33
SNCAIP-207ENST00000504884 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
SNCAIP-207ENST00000504884 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
SNCAIP-207ENST00000504884 KANK4Q5T7N3 995 aaPredicted RBP23.34■■□□□ 1.33
SNCAIP-207ENST00000504884 MRC2Q9UBG0 1479 aa23.33■■□□□ 1.33
SNCAIP-207ENST00000504884 TARBP1Q13395 1621 aaKnown RBP23.31■■□□□ 1.32
SNCAIP-207ENST00000504884 HNRNPUL2Q1KMD3 747 aaKnown RBP23.3■■□□□ 1.32
SNCAIP-207ENST00000504884 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
SNCAIP-207ENST00000504884 MAP3K1Q13233 1512 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms