Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.42□□□□□ -0.42
CUBNO60494 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CUBNO60494 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CUBNO60494 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CUBNO60494 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CUBNO60494 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CUBNO60494 ACKR1-201ENST00000368121 1240 ntBASIC12.42□□□□□ -0.42
CUBNO60494 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CUBNO60494 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CUBNO60494 KRT18P43-201ENST00000469825 1281 ntBASIC12.42□□□□□ -0.42
CUBNO60494 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC12.42□□□□□ -0.42
CUBNO60494 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.42□□□□□ -0.42
CUBNO60494 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.42□□□□□ -0.42
CUBNO60494 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.42□□□□□ -0.42
CUBNO60494 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.42□□□□□ -0.42
CUBNO60494 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CUBNO60494 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.41□□□□□ -0.42
CUBNO60494 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.41□□□□□ -0.42
CUBNO60494 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.41□□□□□ -0.42
CUBNO60494 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CUBNO60494 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.41□□□□□ -0.42
CUBNO60494 HIST2H2BB-201ENST00000449108 381 ntBASIC12.41□□□□□ -0.42
CUBNO60494 AC245100.5-201ENST00000452108 331 ntBASIC12.41□□□□□ -0.42
CUBNO60494 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CUBNO60494 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CUBNO60494 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.41□□□□□ -0.42
CUBNO60494 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 PDIA3P2-201ENST00000428073 158 ntBASIC12.41□□□□□ -0.42
CUBNO60494 AC234782.1-201ENST00000451950 919 ntBASIC12.41□□□□□ -0.42
CUBNO60494 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 AC103988.2-201ENST00000561804 725 ntBASIC12.41□□□□□ -0.42
CUBNO60494 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.41□□□□□ -0.42
CUBNO60494 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CUBNO60494 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CUBNO60494 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.41□□□□□ -0.42
CUBNO60494 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 AL160314.3-201ENST00000556041 767 ntBASIC12.41□□□□□ -0.42
CUBNO60494 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.41□□□□□ -0.42
CUBNO60494 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.41□□□□□ -0.42
CUBNO60494 BNIP3P13-201ENST00000599968 566 ntBASIC12.41□□□□□ -0.42
CUBNO60494 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CUBNO60494 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.41□□□□□ -0.42
CUBNO60494 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CUBNO60494 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
CUBNO60494 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CUBNO60494 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CUBNO60494 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
CUBNO60494 AP001065.2-201ENST00000617205 644 ntBASIC12.4□□□□□ -0.42
CUBNO60494 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CUBNO60494 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.4□□□□□ -0.42
CUBNO60494 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.4□□□□□ -0.42
CUBNO60494 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.4□□□□□ -0.42
CUBNO60494 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CUBNO60494 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CUBNO60494 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms