RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 NISCHQ9Y2I1 1504 aa34.04■■■■□ 3.04
SYCN-201ENST00000318438 ABCC9O60706 1549 aa31.8■■■□□ 2.68
SYCN-201ENST00000318438 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
SYCN-201ENST00000318438 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
SYCN-201ENST00000318438 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
SYCN-201ENST00000318438 PABPN1Q86U42 306 aaKnown RBP eCLIP29.52■■■□□ 2.32
SYCN-201ENST00000318438 NACADO15069 1562 aa29.39■■■□□ 2.29
SYCN-201ENST00000318438 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
SYCN-201ENST00000318438 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
SYCN-201ENST00000318438 BICRAQ9NZM4 1560 aa29.02■■■□□ 2.24
SYCN-201ENST00000318438 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
SYCN-201ENST00000318438 DNAJC5Q9H3Z4 198 aa28.68■■■□□ 2.18
SYCN-201ENST00000318438 MYO15BQ96JP2 1530 aa28.67■■■□□ 2.18
SYCN-201ENST00000318438 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
SYCN-201ENST00000318438 SHROOM4Q9ULL8 1493 aa28.45■■■□□ 2.14
SYCN-201ENST00000318438 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
SYCN-201ENST00000318438 SCRIBQ14160 1630 aa28.16■■■□□ 2.1
SYCN-201ENST00000318438 ZCCHC6Q5VYS8 1495 aaKnown RBP28.03■■■□□ 2.08
SYCN-201ENST00000318438 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
SYCN-201ENST00000318438 CUX2O14529 1486 aa27.69■■■□□ 2.02
SYCN-201ENST00000318438 ERCC6Q03468 1493 aa27.5■■□□□ 1.99
SYCN-201ENST00000318438 NCAPD3P42695 1498 aa27.17■■□□□ 1.94
SYCN-201ENST00000318438 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
SYCN-201ENST00000318438 NESP48681 1621 aa27.09■■□□□ 1.93
SYCN-201ENST00000318438 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
SYCN-201ENST00000318438 THOC2Q8NI27 1593 aaKnown RBP26.92■■□□□ 1.9
SYCN-201ENST00000318438 HMGXB3Q12766 1538 aa26.87■■□□□ 1.89
SYCN-201ENST00000318438 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
SYCN-201ENST00000318438 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
SYCN-201ENST00000318438 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
SYCN-201ENST00000318438 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
SYCN-201ENST00000318438 KIF21AQ7Z4S6 1674 aa26.64■■□□□ 1.86
SYCN-201ENST00000318438 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
SYCN-201ENST00000318438 BAZ1AQ9NRL2 1556 aaPredicted RBP26.46■■□□□ 1.83
SYCN-201ENST00000318438 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
SYCN-201ENST00000318438 MRC2Q9UBG0 1479 aa26.41■■□□□ 1.82
SYCN-201ENST00000318438 WDR62O43379 1518 aa26.35■■□□□ 1.81
SYCN-201ENST00000318438 CADPSQ9ULU8 1353 aa26.32■■□□□ 1.8
SYCN-201ENST00000318438 OSCARQ8IYS5 282 aa26.31■■□□□ 1.8
SYCN-201ENST00000318438 MROH2BQ7Z745 1585 aa26.25■■□□□ 1.79
SYCN-201ENST00000318438 CEP164Q9UPV0 1460 aa26.13■■□□□ 1.77
SYCN-201ENST00000318438 RIMBP3CA6NJZ7 1639 aa26.06■■□□□ 1.76
SYCN-201ENST00000318438 RIMBP3BA6NNM3 1639 aa26.06■■□□□ 1.76
SYCN-201ENST00000318438 RIMBP3Q9UFD9 1639 aa26.06■■□□□ 1.76
SYCN-201ENST00000318438 FANCD2Q9BXW9 1451 aa26.04■■□□□ 1.76
SYCN-201ENST00000318438 ARHGEF11O15085 1522 aa25.9■■□□□ 1.74
SYCN-201ENST00000318438 URB2Q14146 1524 aaKnown RBP25.9■■□□□ 1.74
SYCN-201ENST00000318438 WIZO95785 1651 aa25.87■■□□□ 1.73
SYCN-201ENST00000318438 CFTRP13569 1480 aa25.84■■□□□ 1.73
SYCN-201ENST00000318438 CYB5RLQ6IPT4 315 aa25.8■■□□□ 1.72
SYCN-201ENST00000318438 TRHP20396 242 aaPredicted RBP25.79■■□□□ 1.72
SYCN-201ENST00000318438 ZNF608Q9ULD9 1512 aaPredicted RBP25.74■■□□□ 1.71
SYCN-201ENST00000318438 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
SYCN-201ENST00000318438 IFT140Q96RY7 1462 aa25.63■■□□□ 1.69
SYCN-201ENST00000318438 ARAP1Q96P48 1450 aa25.61■■□□□ 1.69
SYCN-201ENST00000318438 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
SYCN-201ENST00000318438 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
SYCN-201ENST00000318438 CHD1O14646 1710 aa25.45■■□□□ 1.66
SYCN-201ENST00000318438 TOPBP1Q92547 1522 aa25.44■■□□□ 1.66
SYCN-201ENST00000318438 RSF1Q96T23 1441 aaPredicted RBP25.42■■□□□ 1.66
SYCN-201ENST00000318438 FBLN2P98095 1184 aa25.41■■□□□ 1.66
SYCN-201ENST00000318438 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
SYCN-201ENST00000318438 AQRO60306 1485 aaKnown RBP eCLIP25.39■■□□□ 1.65
SYCN-201ENST00000318438 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
SYCN-201ENST00000318438 ABCC8Q09428 1581 aa25.26■■□□□ 1.63
SYCN-201ENST00000318438 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
SYCN-201ENST00000318438 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
SYCN-201ENST00000318438 CLASP1Q7Z460 1538 aa25.16■■□□□ 1.62
SYCN-201ENST00000318438 POLA1P09884 1462 aaPredicted RBP25.14■■□□□ 1.61
SYCN-201ENST00000318438 TDRD9Q8NDG6 1382 aaKnown RBP25.11■■□□□ 1.61
SYCN-201ENST00000318438 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
SYCN-201ENST00000318438 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
SYCN-201ENST00000318438 CHMP7Q8WUX9 453 aaPredicted RBP25.04■■□□□ 1.6
SYCN-201ENST00000318438 SYNJ1O43426 1573 aa25.04■■□□□ 1.6
SYCN-201ENST00000318438 SOGA1O94964 1423 aa25.01■■□□□ 1.59
SYCN-201ENST00000318438 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
SYCN-201ENST00000318438 MAGI1Q96QZ7 1491 aaPredicted RBP24.94■■□□□ 1.58
SYCN-201ENST00000318438 SYNJ2O15056 1496 aa24.89■■□□□ 1.57
SYCN-201ENST00000318438 WDR97A6NE52 1622 aa24.87■■□□□ 1.57
SYCN-201ENST00000318438 GRIN2BQ13224 1484 aa24.87■■□□□ 1.57
SYCN-201ENST00000318438 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
SYCN-201ENST00000318438 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
SYCN-201ENST00000318438 CUX1P39880 1505 aa24.71■■□□□ 1.55
SYCN-201ENST00000318438 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
SYCN-201ENST00000318438 ILDR1Q86SU0 546 aaPredicted RBP24.67■■□□□ 1.54
SYCN-201ENST00000318438 KIF13AQ9H1H9 1805 aa24.6■■□□□ 1.53
SYCN-201ENST00000318438 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
SYCN-201ENST00000318438 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
SYCN-201ENST00000318438 ABCA5Q8WWZ7 1642 aa24.54■■□□□ 1.52
SYCN-201ENST00000318438 KDM4FA0A1W2PPD8 638 aa24.53■■□□□ 1.52
SYCN-201ENST00000318438 NUP160Q12769 1436 aa24.51■■□□□ 1.51
SYCN-201ENST00000318438 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
SYCN-201ENST00000318438 FAM69CQ0P6D2 419 aa24.46■■□□□ 1.51
SYCN-201ENST00000318438 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
SYCN-201ENST00000318438 ADAMTS12P58397 1594 aa24.43■■□□□ 1.5
SYCN-201ENST00000318438 ABCC10Q5T3U5 1492 aa24.4■■□□□ 1.5
SYCN-201ENST00000318438 PRG4Q92954 1404 aaPredicted RBP24.36■■□□□ 1.49
SYCN-201ENST00000318438 FHAD1B1AJZ9 1412 aa24.33■■□□□ 1.49
SYCN-201ENST00000318438 KDM6BO15054 1643 aa24.32■■□□□ 1.48
SYCN-201ENST00000318438 DIP2BQ9P265 1576 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms