RNA–Protein interactions for RNA: ENST00000632790.1

LINC01002-220, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5 BASIC

Gene LINC01002, Length 449 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-220ENST00000632790 NISCHQ9Y2I1 1504 aa36.53■■■■□ 3.44
LINC01002-220ENST00000632790 CCDC180Q9P1Z9 1646 aa32.64■■■□□ 2.82
LINC01002-220ENST00000632790 ABCC9O60706 1549 aa31.81■■■□□ 2.68
LINC01002-220ENST00000632790 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
LINC01002-220ENST00000632790 NACADO15069 1562 aa30.72■■■□□ 2.51
LINC01002-220ENST00000632790 MYO15BQ96JP2 1530 aa30.58■■■□□ 2.49
LINC01002-220ENST00000632790 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
LINC01002-220ENST00000632790 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
LINC01002-220ENST00000632790 DCAF1Q9Y4B6 1507 aa30.37■■■□□ 2.45
LINC01002-220ENST00000632790 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
LINC01002-220ENST00000632790 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
LINC01002-220ENST00000632790 BICRAQ9NZM4 1560 aa29.67■■■□□ 2.34
LINC01002-220ENST00000632790 PABPN1Q86U42 306 aaKnown RBP eCLIP29.64■■■□□ 2.34
LINC01002-220ENST00000632790 SCRIBQ14160 1630 aa29.55■■■□□ 2.32
LINC01002-220ENST00000632790 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.26
LINC01002-220ENST00000632790 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
LINC01002-220ENST00000632790 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
LINC01002-220ENST00000632790 CECR2Q9BXF3 1484 aa28.69■■■□□ 2.18
LINC01002-220ENST00000632790 BAZ1AQ9NRL2 1556 aaPredicted RBP28.38■■■□□ 2.13
LINC01002-220ENST00000632790 SMARCA4P51532 1647 aa28.35■■■□□ 2.13
LINC01002-220ENST00000632790 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
LINC01002-220ENST00000632790 NCAPD3P42695 1498 aa28.3■■■□□ 2.12
LINC01002-220ENST00000632790 ATAD2BQ9ULI0 1458 aa28.22■■■□□ 2.11
LINC01002-220ENST00000632790 HMGXB3Q12766 1538 aa28.18■■■□□ 2.1
LINC01002-220ENST00000632790 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
LINC01002-220ENST00000632790 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
LINC01002-220ENST00000632790 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
LINC01002-220ENST00000632790 RSF1Q96T23 1441 aaPredicted RBP27.72■■■□□ 2.03
LINC01002-220ENST00000632790 WIZO95785 1651 aa27.72■■■□□ 2.03
LINC01002-220ENST00000632790 LAMC3Q9Y6N6 1575 aa27.6■■■□□ 2.01
LINC01002-220ENST00000632790 ERCC6Q03468 1493 aa27.56■■■□□ 2
LINC01002-220ENST00000632790 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
LINC01002-220ENST00000632790 CADPSQ9ULU8 1353 aa27.45■■□□□ 1.98
LINC01002-220ENST00000632790 NESP48681 1621 aa27.45■■□□□ 1.98
LINC01002-220ENST00000632790 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
LINC01002-220ENST00000632790 CUX2O14529 1486 aa27.4■■□□□ 1.98
LINC01002-220ENST00000632790 CFTRP13569 1480 aa27.26■■□□□ 1.95
LINC01002-220ENST00000632790 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
LINC01002-220ENST00000632790 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
LINC01002-220ENST00000632790 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.94
LINC01002-220ENST00000632790 CEP164Q9UPV0 1460 aa27.11■■□□□ 1.93
LINC01002-220ENST00000632790 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
LINC01002-220ENST00000632790 MRC2Q9UBG0 1479 aa27.09■■□□□ 1.93
LINC01002-220ENST00000632790 PRDM2Q13029 1718 aa27.07■■□□□ 1.92
LINC01002-220ENST00000632790 WDR62O43379 1518 aa27■■□□□ 1.91
LINC01002-220ENST00000632790 ABCC8Q09428 1581 aa26.82■■□□□ 1.88
LINC01002-220ENST00000632790 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
LINC01002-220ENST00000632790 URB2Q14146 1524 aaKnown RBP26.76■■□□□ 1.87
LINC01002-220ENST00000632790 DNMBPQ6XZF7 1577 aa26.64■■□□□ 1.86
LINC01002-220ENST00000632790 TOPBP1Q92547 1522 aa26.64■■□□□ 1.85
LINC01002-220ENST00000632790 DNAJC5Q9H3Z4 198 aa26.61■■□□□ 1.85
LINC01002-220ENST00000632790 IFT140Q96RY7 1462 aa26.58■■□□□ 1.85
LINC01002-220ENST00000632790 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.82
LINC01002-220ENST00000632790 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
LINC01002-220ENST00000632790 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
LINC01002-220ENST00000632790 CUX1P39880 1505 aa26.34■■□□□ 1.81
LINC01002-220ENST00000632790 SOGA1O94964 1423 aa26.31■■□□□ 1.8
LINC01002-220ENST00000632790 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
LINC01002-220ENST00000632790 ZNF608Q9ULD9 1512 aaPredicted RBP26.29■■□□□ 1.8
LINC01002-220ENST00000632790 EIF4G3O43432 1585 aaKnown RBP26.26■■□□□ 1.79
LINC01002-220ENST00000632790 WRNQ14191 1432 aaPredicted RBP eCLIP26.2■■□□□ 1.78
LINC01002-220ENST00000632790 OSCARQ8IYS5 282 aa26.19■■□□□ 1.78
LINC01002-220ENST00000632790 RAD54L2Q9Y4B4 1467 aa26.18■■□□□ 1.78
LINC01002-220ENST00000632790 TOP2BQ02880 1626 aa26.17■■□□□ 1.78
LINC01002-220ENST00000632790 BIVM-ERCC5R4GMW8 1640 aa26.16■■□□□ 1.78
LINC01002-220ENST00000632790 AQRO60306 1485 aaKnown RBP eCLIP26.15■■□□□ 1.78
LINC01002-220ENST00000632790 ABCA10Q8WWZ4 1543 aa26.12■■□□□ 1.77
LINC01002-220ENST00000632790 TDRD9Q8NDG6 1382 aaKnown RBP26.08■■□□□ 1.77
LINC01002-220ENST00000632790 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
LINC01002-220ENST00000632790 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
LINC01002-220ENST00000632790 SYNJ1O43426 1573 aa26.03■■□□□ 1.76
LINC01002-220ENST00000632790 GAPVD1Q14C86 1478 aa26.01■■□□□ 1.75
LINC01002-220ENST00000632790 ABCA5Q8WWZ7 1642 aa25.98■■□□□ 1.75
LINC01002-220ENST00000632790 SNAPC4Q5SXM2 1469 aa25.95■■□□□ 1.74
LINC01002-220ENST00000632790 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
LINC01002-220ENST00000632790 CHD1O14646 1710 aa25.93■■□□□ 1.74
LINC01002-220ENST00000632790 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
LINC01002-220ENST00000632790 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
LINC01002-220ENST00000632790 FBLN2P98095 1184 aa25.87■■□□□ 1.73
LINC01002-220ENST00000632790 ERICH3Q5RHP9 1530 aa25.84■■□□□ 1.73
LINC01002-220ENST00000632790 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
LINC01002-220ENST00000632790 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
LINC01002-220ENST00000632790 KIF27Q86VH2 1401 aa25.71■■□□□ 1.71
LINC01002-220ENST00000632790 ARHGEF11O15085 1522 aa25.7■■□□□ 1.7
LINC01002-220ENST00000632790 CLASP1Q7Z460 1538 aa25.7■■□□□ 1.7
LINC01002-220ENST00000632790 GRIN2AQ12879 1464 aa25.68■■□□□ 1.7
LINC01002-220ENST00000632790 RIMBP3CA6NJZ7 1639 aa25.68■■□□□ 1.7
LINC01002-220ENST00000632790 RIMBP3BA6NNM3 1639 aa25.68■■□□□ 1.7
LINC01002-220ENST00000632790 RIMBP3Q9UFD9 1639 aa25.68■■□□□ 1.7
LINC01002-220ENST00000632790 NUP160Q12769 1436 aa25.6■■□□□ 1.69
LINC01002-220ENST00000632790 CUL7Q14999 1698 aa25.59■■□□□ 1.69
LINC01002-220ENST00000632790 IGF1RP08069 1367 aa25.54■■□□□ 1.68
LINC01002-220ENST00000632790 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
LINC01002-220ENST00000632790 CEP170Q5SW79 1584 aa25.49■■□□□ 1.67
LINC01002-220ENST00000632790 ARAP1Q96P48 1450 aa25.45■■□□□ 1.66
LINC01002-220ENST00000632790 SHROOM2Q13796 1616 aa25.42■■□□□ 1.66
LINC01002-220ENST00000632790 CARMIL1Q5VZK9 1371 aa25.42■■□□□ 1.66
LINC01002-220ENST00000632790 CYB5RLQ6IPT4 315 aa25.41■■□□□ 1.66
LINC01002-220ENST00000632790 RUSC2Q8N2Y8 1516 aa25.35■■□□□ 1.65
LINC01002-220ENST00000632790 KIAA0586Q9BVV6 1533 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms