Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 AC091951.1-201ENST00000512854 2465 ntBASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ATXN7L3B-201ENST00000519948 7604 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 GGT4P-201ENST00000623672 1708 ntBASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 TMBIM7P-203ENST00000641617 1718 ntBASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHKB-CPT1BH3BT56 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms