RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 NISCHQ9Y2I1 1504 aa25.99■■□□□ 1.75
PRKD1-201ENST00000331968 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
PRKD1-201ENST00000331968 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
PRKD1-201ENST00000331968 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
PRKD1-201ENST00000331968 EHMT2Q96KQ7 1210 aa22.8■■□□□ 1.24
PRKD1-201ENST00000331968 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
PRKD1-201ENST00000331968 PCGF6Q9BYE7 350 aa22.17■■□□□ 1.14
PRKD1-201ENST00000331968 ABCC9O60706 1549 aa22.1■■□□□ 1.13
PRKD1-201ENST00000331968 TTBK1Q5TCY1 1321 aaPredicted RBP21.83■■□□□ 1.09
PRKD1-201ENST00000331968 LOC105371045A0A1W2PR82 267 aa21.83■■□□□ 1.09
PRKD1-201ENST00000331968 PPARGC1BQ86YN6 1023 aaKnown RBP21.81■■□□□ 1.08
PRKD1-201ENST00000331968 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
PRKD1-201ENST00000331968 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
PRKD1-201ENST00000331968 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
PRKD1-201ENST00000331968 RANGAP1P46060 587 aaPredicted RBP21.64■■□□□ 1.05
PRKD1-201ENST00000331968 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
PRKD1-201ENST00000331968 HRCP23327 699 aa21.58■■□□□ 1.05
PRKD1-201ENST00000331968 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
PRKD1-201ENST00000331968 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
PRKD1-201ENST00000331968 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
PRKD1-201ENST00000331968 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
PRKD1-201ENST00000331968 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.93
PRKD1-201ENST00000331968 ATP1B4Q9UN42 357 aaPredicted RBP20.84■□□□□ 0.93
PRKD1-201ENST00000331968 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
PRKD1-201ENST00000331968 RSF1Q96T23 1441 aaPredicted RBP20.8■□□□□ 0.92
PRKD1-201ENST00000331968 APLP2Q06481 763 aa20.79■□□□□ 0.92
PRKD1-201ENST00000331968 CCER1Q8TC90 406 aaPredicted RBP20.77■□□□□ 0.92
PRKD1-201ENST00000331968 YTHDC1Q96MU7 727 aaKnown RBP20.71■□□□□ 0.91
PRKD1-201ENST00000331968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
PRKD1-201ENST00000331968 ZEB1P37275 1124 aaPredicted RBP20.59■□□□□ 0.89
PRKD1-201ENST00000331968 HNRNPUL2Q1KMD3 747 aaKnown RBP20.55■□□□□ 0.88
PRKD1-201ENST00000331968 ITGAEP38570 1179 aa20.55■□□□□ 0.88
PRKD1-201ENST00000331968 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
PRKD1-201ENST00000331968 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
PRKD1-201ENST00000331968 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
PRKD1-201ENST00000331968 NACADO15069 1562 aa20.41■□□□□ 0.86
PRKD1-201ENST00000331968 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
PRKD1-201ENST00000331968 PELP1Q8IZL8 1130 aaKnown RBP20.38■□□□□ 0.85
PRKD1-201ENST00000331968 CENPBP07199 599 aaPredicted RBP20.37■□□□□ 0.85
PRKD1-201ENST00000331968 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
PRKD1-201ENST00000331968 P3H3Q8IVL6 736 aa20.31■□□□□ 0.84
PRKD1-201ENST00000331968 GTF3C3Q9Y5Q9 886 aa20.27■□□□□ 0.83
PRKD1-201ENST00000331968 WIZO95785 1651 aa20.23■□□□□ 0.83
PRKD1-201ENST00000331968 DIEXFQ68CQ4 756 aaKnown RBP20.22■□□□□ 0.83
PRKD1-201ENST00000331968 ARID3CA6NKF2 412 aa20.17■□□□□ 0.82
PRKD1-201ENST00000331968 NEUROD1Q13562 356 aa20.13■□□□□ 0.81
PRKD1-201ENST00000331968 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
PRKD1-201ENST00000331968 SOGA1O94964 1423 aa20.06■□□□□ 0.8
PRKD1-201ENST00000331968 CCDC88BA6NC98 1476 aa20.04■□□□□ 0.8
PRKD1-201ENST00000331968 ACIN1Q9UKV3 1341 aaKnown RBP20.04■□□□□ 0.8
PRKD1-201ENST00000331968 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
PRKD1-201ENST00000331968 FBLN2P98095 1184 aa19.98■□□□□ 0.79
PRKD1-201ENST00000331968 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
PRKD1-201ENST00000331968 FAM50AQ14320 339 aaKnown RBP19.94■□□□□ 0.78
PRKD1-201ENST00000331968 WRNQ14191 1432 aaPredicted RBP eCLIP19.9■□□□□ 0.78
PRKD1-201ENST00000331968 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
PRKD1-201ENST00000331968 CNGB1Q14028 1251 aaPredicted RBP19.8■□□□□ 0.76
PRKD1-201ENST00000331968 CEP162Q5TB80 1403 aa19.78■□□□□ 0.76
PRKD1-201ENST00000331968 SMARCA4P51532 1647 aa19.71■□□□□ 0.75
PRKD1-201ENST00000331968 BCANQ96GW7 911 aa19.69■□□□□ 0.74
PRKD1-201ENST00000331968 CLIP1P30622 1438 aa19.67■□□□□ 0.74
PRKD1-201ENST00000331968 ZNF316A6NFI3 1004 aaPredicted RBP19.67■□□□□ 0.74
PRKD1-201ENST00000331968 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
PRKD1-201ENST00000331968 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
PRKD1-201ENST00000331968 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
PRKD1-201ENST00000331968 MIER1Q8N108 512 aa19.61■□□□□ 0.73
PRKD1-201ENST00000331968 POLR3GLQ9BT43 218 aa19.56■□□□□ 0.72
PRKD1-201ENST00000331968 GOLGA3Q08378 1498 aa19.53■□□□□ 0.72
PRKD1-201ENST00000331968 TNIKQ9UKE5 1360 aa19.53■□□□□ 0.72
PRKD1-201ENST00000331968 SMARCA2P51531 1590 aa19.52■□□□□ 0.72
PRKD1-201ENST00000331968 KANK4Q5T7N3 995 aaPredicted RBP19.52■□□□□ 0.72
PRKD1-201ENST00000331968 TRIM52Q96A61 297 aa19.52■□□□□ 0.72
PRKD1-201ENST00000331968 CHIC2Q9UKJ5 165 aa19.51■□□□□ 0.71
PRKD1-201ENST00000331968 HIRIP3Q9BW71 556 aaPredicted RBP19.49■□□□□ 0.71
PRKD1-201ENST00000331968 ZNF777Q9ULD5 760 aaPredicted RBP19.47■□□□□ 0.71
PRKD1-201ENST00000331968 MYT1LQ9UL68 1186 aa19.46■□□□□ 0.71
PRKD1-201ENST00000331968 MYT1Q01538 1121 aa19.44■□□□□ 0.7
PRKD1-201ENST00000331968 CUX2O14529 1486 aa19.43■□□□□ 0.7
PRKD1-201ENST00000331968 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
PRKD1-201ENST00000331968 RAPGEF2Q9Y4G8 1499 aa19.42■□□□□ 0.7
PRKD1-201ENST00000331968 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
PRKD1-201ENST00000331968 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
PRKD1-201ENST00000331968 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
PRKD1-201ENST00000331968 ZNF326Q5BKZ1 582 aaKnown RBP19.36■□□□□ 0.69
PRKD1-201ENST00000331968 EEA1Q15075 1411 aa19.35■□□□□ 0.69
PRKD1-201ENST00000331968 NEFLP07196 543 aa19.33■□□□□ 0.68
PRKD1-201ENST00000331968 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
PRKD1-201ENST00000331968 UNC13AQ9UPW8 1703 aa19.29■□□□□ 0.68
PRKD1-201ENST00000331968 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
PRKD1-201ENST00000331968 ERICH6Q7L0X2 663 aa19.28■□□□□ 0.68
PRKD1-201ENST00000331968 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
PRKD1-201ENST00000331968 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
PRKD1-201ENST00000331968 EIF4G1Q04637 1599 aaKnown RBP19.26■□□□□ 0.67
PRKD1-201ENST00000331968 SIN3AQ96ST3 1273 aa19.24■□□□□ 0.67
PRKD1-201ENST00000331968 NESP48681 1621 aa19.23■□□□□ 0.67
PRKD1-201ENST00000331968 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
PRKD1-201ENST00000331968 MTUS2Q5JR59 1369 aa19.19■□□□□ 0.66
PRKD1-201ENST00000331968 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
PRKD1-201ENST00000331968 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
PRKD1-201ENST00000331968 VPS8Q8N3P4 1428 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms