RNA–Protein interactions for RNA: ENST00000373091.7

GRIK3-201, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRIK3, Length 9,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-201ENST00000373091 PELP1Q8IZL8 1130 aaKnown RBP18.05■□□□□ 0.48
GRIK3-201ENST00000373091 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.47
GRIK3-201ENST00000373091 NISCHQ9Y2I1 1504 aa17.51■□□□□ 0.39
GRIK3-201ENST00000373091 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
GRIK3-201ENST00000373091 MYT1Q01538 1121 aa17.23■□□□□ 0.35
GRIK3-201ENST00000373091 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
GRIK3-201ENST00000373091 APLP2Q06481 763 aa17.12■□□□□ 0.33
GRIK3-201ENST00000373091 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
GRIK3-201ENST00000373091 ERICH6Q7L0X2 663 aa17.02■□□□□ 0.31
GRIK3-201ENST00000373091 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
GRIK3-201ENST00000373091 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
GRIK3-201ENST00000373091 FAM9AQ8IZU1 332 aaPredicted RBP16.87■□□□□ 0.29
GRIK3-201ENST00000373091 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
GRIK3-201ENST00000373091 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
GRIK3-201ENST00000373091 NEFLP07196 543 aa16.66■□□□□ 0.26
GRIK3-201ENST00000373091 YTHDC1Q96MU7 727 aaKnown RBP16.45■□□□□ 0.22
GRIK3-201ENST00000373091 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
GRIK3-201ENST00000373091 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
GRIK3-201ENST00000373091 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
GRIK3-201ENST00000373091 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
GRIK3-201ENST00000373091 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
GRIK3-201ENST00000373091 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
GRIK3-201ENST00000373091 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
GRIK3-201ENST00000373091 RTL5Q5HYW3 569 aaPredicted RBP15.97■□□□□ 0.15
GRIK3-201ENST00000373091 HRCP23327 699 aa15.94■□□□□ 0.14
GRIK3-201ENST00000373091 ZNF316A6NFI3 1004 aaPredicted RBP15.91■□□□□ 0.14
GRIK3-201ENST00000373091 CLSPNQ9HAW4 1339 aa15.67■□□□□ 0.1
GRIK3-201ENST00000373091 DIEXFQ68CQ4 756 aaKnown RBP15.66■□□□□ 0.1
GRIK3-201ENST00000373091 POLR3GLQ9BT43 218 aa15.61■□□□□ 0.09
GRIK3-201ENST00000373091 PPARGC1BQ86YN6 1023 aaKnown RBP15.59■□□□□ 0.09
GRIK3-201ENST00000373091 ITGAEP38570 1179 aa15.53■□□□□ 0.08
GRIK3-201ENST00000373091 CDK11AQ9UQ88 783 aaPredicted RBP15.48■□□□□ 0.07
GRIK3-201ENST00000373091 MYT1LQ9UL68 1186 aa15.48■□□□□ 0.07
GRIK3-201ENST00000373091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.07
GRIK3-201ENST00000373091 HNRNPUL2Q1KMD3 747 aaKnown RBP15.46■□□□□ 0.07
GRIK3-201ENST00000373091 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
GRIK3-201ENST00000373091 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
GRIK3-201ENST00000373091 ANP32CO43423 234 aa15.38■□□□□ 0.05
GRIK3-201ENST00000373091 ANP32AP39687 249 aaKnown RBP15.36■□□□□ 0.05
GRIK3-201ENST00000373091 CHIC1Q5VXU3 224 aa15.34■□□□□ 0.05
GRIK3-201ENST00000373091 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
GRIK3-201ENST00000373091 GLIPR1L2Q4G1C9 344 aa15.33■□□□□ 0.04
GRIK3-201ENST00000373091 ANP32BQ92688 251 aaKnown RBP15.29■□□□□ 0.04
GRIK3-201ENST00000373091 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
GRIK3-201ENST00000373091 CNGB1Q14028 1251 aaPredicted RBP15.28■□□□□ 0.04
GRIK3-201ENST00000373091 CANXP27824 592 aaKnown RBP15.24■□□□□ 0.03
GRIK3-201ENST00000373091 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
GRIK3-201ENST00000373091 BCANQ96GW7 911 aa15.18■□□□□ 0.02
GRIK3-201ENST00000373091 NEFMP07197 916 aa15.16■□□□□ 0.02
GRIK3-201ENST00000373091 TRIM52Q96A61 297 aa15.15■□□□□ 0.02
GRIK3-201ENST00000373091 ACIN1Q9UKV3 1341 aaKnown RBP15.14■□□□□ 0.01
GRIK3-201ENST00000373091 NEUROD1Q13562 356 aa15.11■□□□□ 0.01
GRIK3-201ENST00000373091 UPF2Q9HAU5 1272 aaKnown RBP15.1■□□□□ 0.01
GRIK3-201ENST00000373091 HSP90AA1P07900 732 aaKnown RBP15.07■□□□□ 0
GRIK3-201ENST00000373091 EIF5BO60841 1220 aaKnown RBP15.04■□□□□ -0
GRIK3-201ENST00000373091 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
GRIK3-201ENST00000373091 ZNF326Q5BKZ1 582 aaKnown RBP15.01□□□□□ -0.01
GRIK3-201ENST00000373091 CCDC180Q9P1Z9 1646 aa14.98□□□□□ -0.01
GRIK3-201ENST00000373091 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
GRIK3-201ENST00000373091 TONSLQ96HA7 1378 aa14.9□□□□□ -0.02
GRIK3-201ENST00000373091 SLC24A1O60721 1099 aa14.89□□□□□ -0.03
GRIK3-201ENST00000373091 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.84□□□□□ -0.03
GRIK3-201ENST00000373091 FKBP8Q14318 412 aa14.83□□□□□ -0.03
GRIK3-201ENST00000373091 ANP32EQ9BTT0 268 aa14.83□□□□□ -0.04
GRIK3-201ENST00000373091 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
GRIK3-201ENST00000373091 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
GRIK3-201ENST00000373091 CCDC136Q96JN2 1154 aa14.77□□□□□ -0.04
GRIK3-201ENST00000373091 HNRNPUQ00839 825 aaKnown RBP eCLIP14.77□□□□□ -0.05
GRIK3-201ENST00000373091 TNNT2P45379 298 aaPredicted RBP14.76□□□□□ -0.05
GRIK3-201ENST00000373091 DDRGK1Q96HY6 314 aa14.74□□□□□ -0.05
GRIK3-201ENST00000373091 BECN1Q14457 450 aa14.74□□□□□ -0.05
GRIK3-201ENST00000373091 NBR1Q14596 966 aa14.74□□□□□ -0.05
GRIK3-201ENST00000373091 MYH16Q9H6N6 1097 aa14.71□□□□□ -0.05
GRIK3-201ENST00000373091 TRIM44Q96DX7 344 aaPredicted RBP14.69□□□□□ -0.06
GRIK3-201ENST00000373091 CDK11BP21127 795 aaKnown RBP14.68□□□□□ -0.06
GRIK3-201ENST00000373091 GOLGA6L22H0YM25 854 aa14.67□□□□□ -0.06
GRIK3-201ENST00000373091 TMC1Q8TDI8 760 aa14.65□□□□□ -0.06
GRIK3-201ENST00000373091 ABCC9O60706 1549 aa14.65□□□□□ -0.06
GRIK3-201ENST00000373091 WDR43Q15061 677 aaKnown RBP eCLIP14.63□□□□□ -0.07
GRIK3-201ENST00000373091 FAM9BQ8IZU0 186 aa14.62□□□□□ -0.07
GRIK3-201ENST00000373091 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
GRIK3-201ENST00000373091 NCLP19338 710 aaKnown RBP14.6□□□□□ -0.07
GRIK3-201ENST00000373091 ERICH6BQ5W0A0 696 aa14.57□□□□□ -0.08
GRIK3-201ENST00000373091 ESF1Q9H501 851 aaKnown RBP14.56□□□□□ -0.08
GRIK3-201ENST00000373091 FBLN2P98095 1184 aa14.56□□□□□ -0.08
GRIK3-201ENST00000373091 ARXQ96QS3 562 aa14.56□□□□□ -0.08
GRIK3-201ENST00000373091 DDX10Q13206 875 aaKnown RBP14.55□□□□□ -0.08
GRIK3-201ENST00000373091 MRS2Q9HD23 443 aa14.54□□□□□ -0.08
GRIK3-201ENST00000373091 CASC1Q6TDU7 716 aa14.54□□□□□ -0.08
GRIK3-201ENST00000373091 ZNF777Q9ULD5 760 aaPredicted RBP14.53□□□□□ -0.08
GRIK3-201ENST00000373091 ZCCHC6Q5VYS8 1495 aaKnown RBP14.53□□□□□ -0.08
GRIK3-201ENST00000373091 ZRSR1Q15695 479 aaKnown RBP14.51□□□□□ -0.09
GRIK3-201ENST00000373091 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
GRIK3-201ENST00000373091 STAG3Q9UJ98 1225 aa14.49□□□□□ -0.09
GRIK3-201ENST00000373091 PPM1GO15355 546 aaPredicted RBP14.48□□□□□ -0.09
GRIK3-201ENST00000373091 EEA1Q15075 1411 aa14.46□□□□□ -0.09
GRIK3-201ENST00000373091 PTMAP06454 111 aaKnown RBP14.46□□□□□ -0.09
GRIK3-201ENST00000373091 GOLGA6L6A8MZA4 724 aa14.46□□□□□ -0.1
GRIK3-201ENST00000373091 CLIP1P30622 1438 aa14.45□□□□□ -0.1
GRIK3-201ENST00000373091 P3H3Q8IVL6 736 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms