RNA–Protein interactions for RNA: ENST00000337623.7

EDRF1-201, Transcript of erythroid differentiation regulatory factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene EDRF1, Length 4,387 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-201ENST00000337623 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.41
EDRF1-201ENST00000337623 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
EDRF1-201ENST00000337623 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
EDRF1-201ENST00000337623 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
EDRF1-201ENST00000337623 EHMT2Q96KQ7 1210 aa20.93■□□□□ 0.94
EDRF1-201ENST00000337623 FAM9AQ8IZU1 332 aaPredicted RBP20.29■□□□□ 0.84
EDRF1-201ENST00000337623 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
EDRF1-201ENST00000337623 ZCCHC6Q5VYS8 1495 aaKnown RBP20.14■□□□□ 0.81
EDRF1-201ENST00000337623 CHIC1Q5VXU3 224 aa20.09■□□□□ 0.81
EDRF1-201ENST00000337623 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
EDRF1-201ENST00000337623 PCGF6Q9BYE7 350 aa20.03■□□□□ 0.8
EDRF1-201ENST00000337623 APLP2Q06481 763 aa20.01■□□□□ 0.79
EDRF1-201ENST00000337623 TTBK1Q5TCY1 1321 aaPredicted RBP20■□□□□ 0.79
EDRF1-201ENST00000337623 HRCP23327 699 aa19.97■□□□□ 0.79
EDRF1-201ENST00000337623 ATP1B4Q9UN42 357 aaPredicted RBP19.91■□□□□ 0.78
EDRF1-201ENST00000337623 TRIM41Q8WV44 630 aa19.69■□□□□ 0.74
EDRF1-201ENST00000337623 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
EDRF1-201ENST00000337623 ABCC9O60706 1549 aa19.65■□□□□ 0.74
EDRF1-201ENST00000337623 ZEB1P37275 1124 aaPredicted RBP19.63■□□□□ 0.73
EDRF1-201ENST00000337623 TRIM26Q12899 539 aaPredicted RBP19.61■□□□□ 0.73
EDRF1-201ENST00000337623 UBTFP17480 764 aaKnown RBP19.59■□□□□ 0.73
EDRF1-201ENST00000337623 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
EDRF1-201ENST00000337623 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
EDRF1-201ENST00000337623 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
EDRF1-201ENST00000337623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.37■□□□□ 0.69
EDRF1-201ENST00000337623 HNRNPUL2Q1KMD3 747 aaKnown RBP19.37■□□□□ 0.69
EDRF1-201ENST00000337623 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
EDRF1-201ENST00000337623 MYT1LQ9UL68 1186 aa19.33■□□□□ 0.69
EDRF1-201ENST00000337623 SCRIBQ14160 1630 aa19.08■□□□□ 0.64
EDRF1-201ENST00000337623 PELP1Q8IZL8 1130 aaKnown RBP19.08■□□□□ 0.64
EDRF1-201ENST00000337623 FBLN2P98095 1184 aa19.06■□□□□ 0.64
EDRF1-201ENST00000337623 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
EDRF1-201ENST00000337623 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
EDRF1-201ENST00000337623 ITGAEP38570 1179 aa19.01■□□□□ 0.63
EDRF1-201ENST00000337623 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.62
EDRF1-201ENST00000337623 RB1CC1Q8TDY2 1594 aa18.86■□□□□ 0.61
EDRF1-201ENST00000337623 NACADO15069 1562 aa18.77■□□□□ 0.6
EDRF1-201ENST00000337623 POLR3GLQ9BT43 218 aa18.65■□□□□ 0.58
EDRF1-201ENST00000337623 ARID3CA6NKF2 412 aa18.63■□□□□ 0.57
EDRF1-201ENST00000337623 CNGB1Q14028 1251 aaPredicted RBP18.6■□□□□ 0.57
EDRF1-201ENST00000337623 DIEXFQ68CQ4 756 aaKnown RBP18.58■□□□□ 0.57
EDRF1-201ENST00000337623 CECR2Q9BXF3 1484 aa18.56■□□□□ 0.56
EDRF1-201ENST00000337623 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
EDRF1-201ENST00000337623 MROH2BQ7Z745 1585 aa18.5■□□□□ 0.55
EDRF1-201ENST00000337623 P3H3Q8IVL6 736 aa18.5■□□□□ 0.55
EDRF1-201ENST00000337623 BAZ1AQ9NRL2 1556 aaPredicted RBP18.49■□□□□ 0.55
EDRF1-201ENST00000337623 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
EDRF1-201ENST00000337623 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
EDRF1-201ENST00000337623 FAM50AQ14320 339 aaKnown RBP18.43■□□□□ 0.54
EDRF1-201ENST00000337623 EEA1Q15075 1411 aa18.43■□□□□ 0.54
EDRF1-201ENST00000337623 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
EDRF1-201ENST00000337623 MYT1Q01538 1121 aa18.4■□□□□ 0.54
EDRF1-201ENST00000337623 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
EDRF1-201ENST00000337623 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
EDRF1-201ENST00000337623 WIZO95785 1651 aa18.35■□□□□ 0.53
EDRF1-201ENST00000337623 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
EDRF1-201ENST00000337623 CEP162Q5TB80 1403 aa18.34■□□□□ 0.53
EDRF1-201ENST00000337623 TNIKQ9UKE5 1360 aa18.33■□□□□ 0.53
EDRF1-201ENST00000337623 TRIM52Q96A61 297 aa18.31■□□□□ 0.52
EDRF1-201ENST00000337623 GTF3C3Q9Y5Q9 886 aa18.29■□□□□ 0.52
EDRF1-201ENST00000337623 GOLGA3Q08378 1498 aa18.25■□□□□ 0.51
EDRF1-201ENST00000337623 BCANQ96GW7 911 aa18.24■□□□□ 0.51
EDRF1-201ENST00000337623 NPM1P06748 294 aaKnown RBP eCLIP18.24■□□□□ 0.51
EDRF1-201ENST00000337623 ZNF777Q9ULD5 760 aaPredicted RBP18.24■□□□□ 0.51
EDRF1-201ENST00000337623 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
EDRF1-201ENST00000337623 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
EDRF1-201ENST00000337623 NEUROD1Q13562 356 aa18.19■□□□□ 0.5
EDRF1-201ENST00000337623 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
EDRF1-201ENST00000337623 ZNF326Q5BKZ1 582 aaKnown RBP18.16■□□□□ 0.5
EDRF1-201ENST00000337623 ABCC8Q09428 1581 aa18.14■□□□□ 0.5
EDRF1-201ENST00000337623 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
EDRF1-201ENST00000337623 SOGA1O94964 1423 aa18.13■□□□□ 0.49
EDRF1-201ENST00000337623 CEP164Q9UPV0 1460 aa18.12■□□□□ 0.49
EDRF1-201ENST00000337623 CLIP1P30622 1438 aa18.11■□□□□ 0.49
EDRF1-201ENST00000337623 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
EDRF1-201ENST00000337623 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
EDRF1-201ENST00000337623 SMARCA2P51531 1590 aa18■□□□□ 0.47
EDRF1-201ENST00000337623 CDK11AQ9UQ88 783 aaPredicted RBP17.99■□□□□ 0.47
EDRF1-201ENST00000337623 CHGAP10645 457 aaKnown RBP17.96■□□□□ 0.47
EDRF1-201ENST00000337623 NEFLP07196 543 aa17.94■□□□□ 0.46
EDRF1-201ENST00000337623 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
EDRF1-201ENST00000337623 CLSPNQ9HAW4 1339 aa17.93■□□□□ 0.46
EDRF1-201ENST00000337623 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
EDRF1-201ENST00000337623 VPS8Q8N3P4 1428 aa17.91■□□□□ 0.46
EDRF1-201ENST00000337623 MIER1Q8N108 512 aa17.9■□□□□ 0.46
EDRF1-201ENST00000337623 KCNH8Q96L42 1107 aa17.89■□□□□ 0.45
EDRF1-201ENST00000337623 SLC24A1O60721 1099 aa17.86■□□□□ 0.45
EDRF1-201ENST00000337623 RUSC2Q8N2Y8 1516 aa17.85■□□□□ 0.45
EDRF1-201ENST00000337623 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
EDRF1-201ENST00000337623 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
EDRF1-201ENST00000337623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.81■□□□□ 0.444e-7■■■■□ 22.7
EDRF1-201ENST00000337623 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
EDRF1-201ENST00000337623 CHIC2Q9UKJ5 165 aa17.76■□□□□ 0.43
EDRF1-201ENST00000337623 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
EDRF1-201ENST00000337623 KIF21BO75037 1637 aa17.72■□□□□ 0.43
EDRF1-201ENST00000337623 ATAD2BQ9ULI0 1458 aa17.71■□□□□ 0.43
EDRF1-201ENST00000337623 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
EDRF1-201ENST00000337623 ERICH6Q7L0X2 663 aa17.7■□□□□ 0.42
EDRF1-201ENST00000337623 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
EDRF1-201ENST00000337623 RAPGEF2Q9Y4G8 1499 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms