RNA–Protein interactions for RNA: ENST00000407029.5

MKL1-205, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-205ENST00000407029 NISCHQ9Y2I1 1504 aa25.51■■□□□ 1.67
MKL1-205ENST00000407029 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
MKL1-205ENST00000407029 SHROOM4Q9ULL8 1493 aa22.57■■□□□ 1.2
MKL1-205ENST00000407029 SUPT5HO00267 1087 aaKnown RBP22.19■■□□□ 1.14
MKL1-205ENST00000407029 ABCC9O60706 1549 aa21.59■■□□□ 1.05
MKL1-205ENST00000407029 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
MKL1-205ENST00000407029 ZCCHC6Q5VYS8 1495 aaKnown RBP21.27■■□□□ 1
MKL1-205ENST00000407029 PELP1Q8IZL8 1130 aaKnown RBP21.04■□□□□ 0.96
MKL1-205ENST00000407029 PABPN1Q86U42 306 aaKnown RBP eCLIP20.9■□□□□ 0.94
MKL1-205ENST00000407029 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
MKL1-205ENST00000407029 SCRIBQ14160 1630 aa20.78■□□□□ 0.92
MKL1-205ENST00000407029 FAM9AQ8IZU1 332 aaPredicted RBP20.72■□□□□ 0.91
MKL1-205ENST00000407029 HRCP23327 699 aa20.69■□□□□ 0.9
MKL1-205ENST00000407029 TRIM41Q8WV44 630 aa20.6■□□□□ 0.89
MKL1-205ENST00000407029 DCAF1Q9Y4B6 1507 aa20.52■□□□□ 0.88
MKL1-205ENST00000407029 PCGF6Q9BYE7 350 aa20.51■□□□□ 0.87
MKL1-205ENST00000407029 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
MKL1-205ENST00000407029 NACADO15069 1562 aa20.47■□□□□ 0.87
MKL1-205ENST00000407029 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
MKL1-205ENST00000407029 PPARGC1BQ86YN6 1023 aaKnown RBP20.46■□□□□ 0.87
MKL1-205ENST00000407029 MYT1Q01538 1121 aa20.45■□□□□ 0.86
MKL1-205ENST00000407029 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
MKL1-205ENST00000407029 RSF1Q96T23 1441 aaPredicted RBP20.13■□□□□ 0.81
MKL1-205ENST00000407029 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
MKL1-205ENST00000407029 MYO15BQ96JP2 1530 aa20.1■□□□□ 0.81
MKL1-205ENST00000407029 CECR2Q9BXF3 1484 aa20.08■□□□□ 0.81
MKL1-205ENST00000407029 UBTFP17480 764 aaKnown RBP20.02■□□□□ 0.79
MKL1-205ENST00000407029 TTBK1Q5TCY1 1321 aaPredicted RBP20.01■□□□□ 0.79
MKL1-205ENST00000407029 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
MKL1-205ENST00000407029 APLP2Q06481 763 aa19.83■□□□□ 0.77
MKL1-205ENST00000407029 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
MKL1-205ENST00000407029 BAZ1AQ9NRL2 1556 aaPredicted RBP19.8■□□□□ 0.76
MKL1-205ENST00000407029 ATP1B4Q9UN42 357 aaPredicted RBP19.62■□□□□ 0.73
MKL1-205ENST00000407029 BAZ1BQ9UIG0 1483 aaKnown RBP19.62■□□□□ 0.73
MKL1-205ENST00000407029 WIZO95785 1651 aa19.61■□□□□ 0.73
MKL1-205ENST00000407029 ZEB1P37275 1124 aaPredicted RBP19.58■□□□□ 0.73
MKL1-205ENST00000407029 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
MKL1-205ENST00000407029 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
MKL1-205ENST00000407029 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
MKL1-205ENST00000407029 SMARCA4P51532 1647 aa19.45■□□□□ 0.7
MKL1-205ENST00000407029 CCDC88BA6NC98 1476 aa19.44■□□□□ 0.7
MKL1-205ENST00000407029 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
MKL1-205ENST00000407029 ACIN1Q9UKV3 1341 aaKnown RBP19.36■□□□□ 0.69
MKL1-205ENST00000407029 ATAD2BQ9ULI0 1458 aa19.34■□□□□ 0.69
MKL1-205ENST00000407029 TOP2AP11388 1531 aaKnown RBP19.34■□□□□ 0.69
MKL1-205ENST00000407029 SMARCA2P51531 1590 aa19.33■□□□□ 0.69
MKL1-205ENST00000407029 WRNQ14191 1432 aaPredicted RBP eCLIP19.31■□□□□ 0.68
MKL1-205ENST00000407029 NEUROD1Q13562 356 aa19.25■□□□□ 0.67
MKL1-205ENST00000407029 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
MKL1-205ENST00000407029 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
MKL1-205ENST00000407029 CCER1Q8TC90 406 aaPredicted RBP19.24■□□□□ 0.67
MKL1-205ENST00000407029 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
MKL1-205ENST00000407029 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
MKL1-205ENST00000407029 ITGAEP38570 1179 aa19.14■□□□□ 0.65
MKL1-205ENST00000407029 FBLN2P98095 1184 aa19.13■□□□□ 0.65
MKL1-205ENST00000407029 P3H3Q8IVL6 736 aa19.13■□□□□ 0.65
MKL1-205ENST00000407029 HNRNPUL2Q1KMD3 747 aaKnown RBP19.13■□□□□ 0.65
MKL1-205ENST00000407029 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
MKL1-205ENST00000407029 SOGA1O94964 1423 aa19.11■□□□□ 0.65
MKL1-205ENST00000407029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
MKL1-205ENST00000407029 EEA1Q15075 1411 aa19■□□□□ 0.63
MKL1-205ENST00000407029 NCAPD3P42695 1498 aa18.99■□□□□ 0.63
MKL1-205ENST00000407029 DIEXFQ68CQ4 756 aaKnown RBP18.99■□□□□ 0.63
MKL1-205ENST00000407029 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
MKL1-205ENST00000407029 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
MKL1-205ENST00000407029 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
MKL1-205ENST00000407029 GOLGA3Q08378 1498 aa18.91■□□□□ 0.62
MKL1-205ENST00000407029 ARID3CA6NKF2 412 aa18.9■□□□□ 0.62
MKL1-205ENST00000407029 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
MKL1-205ENST00000407029 CLIP1P30622 1438 aa18.88■□□□□ 0.61
MKL1-205ENST00000407029 CUX2O14529 1486 aa18.85■□□□□ 0.61
MKL1-205ENST00000407029 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
MKL1-205ENST00000407029 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
MKL1-205ENST00000407029 FAM50AQ14320 339 aaKnown RBP18.84■□□□□ 0.61
MKL1-205ENST00000407029 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.6
MKL1-205ENST00000407029 CC2D2AQ9P2K1 1620 aa18.83■□□□□ 0.6
MKL1-205ENST00000407029 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
MKL1-205ENST00000407029 PDS5BQ9NTI5 1447 aa18.79■□□□□ 0.6
MKL1-205ENST00000407029 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
MKL1-205ENST00000407029 FANCD2Q9BXW9 1451 aa18.75■□□□□ 0.59
MKL1-205ENST00000407029 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
MKL1-205ENST00000407029 TDRD9Q8NDG6 1382 aaKnown RBP18.72■□□□□ 0.59
MKL1-205ENST00000407029 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
MKL1-205ENST00000407029 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
MKL1-205ENST00000407029 NESP48681 1621 aa18.68■□□□□ 0.58
MKL1-205ENST00000407029 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
MKL1-205ENST00000407029 CFTRP13569 1480 aa18.67■□□□□ 0.58
MKL1-205ENST00000407029 SYNJ1O43426 1573 aa18.62■□□□□ 0.57
MKL1-205ENST00000407029 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
MKL1-205ENST00000407029 ANP32EQ9BTT0 268 aa18.59■□□□□ 0.57
MKL1-205ENST00000407029 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
MKL1-205ENST00000407029 MYT1LQ9UL68 1186 aa18.55■□□□□ 0.56
MKL1-205ENST00000407029 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
MKL1-205ENST00000407029 ERICH6Q7L0X2 663 aa18.53■□□□□ 0.56
MKL1-205ENST00000407029 ZNF777Q9ULD5 760 aaPredicted RBP18.47■□□□□ 0.55
MKL1-205ENST00000407029 CUX1P39880 1505 aa18.47■□□□□ 0.55
MKL1-205ENST00000407029 MTUS2Q5JR59 1369 aa18.46■□□□□ 0.55
MKL1-205ENST00000407029 CDK11AQ9UQ88 783 aaPredicted RBP18.46■□□□□ 0.55
MKL1-205ENST00000407029 TRIM52Q96A61 297 aa18.46■□□□□ 0.55
MKL1-205ENST00000407029 IGF1RP08069 1367 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms