Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00588Q9Y4M8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00588Q9Y4M8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 CYP2T1P-202ENST00000641596 2535 ntBASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 RN7SL837P-201ENST00000463010 287 ntBASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AL033527.5-201ENST00000641382 801 ntBASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AL118508.1-201ENST00000613502 2345 ntBASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC00588Q9Y4M8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00588Q9Y4M8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms