RNA–Protein interactions for RNA: ENST00000333070.4

LCK-201, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene LCK, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-201ENST00000333070 NISCHQ9Y2I1 1504 aa35.84■■■■□ 3.33
LCK-201ENST00000333070 CCDC180Q9P1Z9 1646 aa31.01■■■□□ 2.56
LCK-201ENST00000333070 ZCCHC6Q5VYS8 1495 aaKnown RBP30.17■■■□□ 2.42
LCK-201ENST00000333070 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
LCK-201ENST00000333070 SHROOM4Q9ULL8 1493 aa29.52■■■□□ 2.32
LCK-201ENST00000333070 DCAF8L2P0C7V8 631 aa29.48■■■□□ 2.31
LCK-201ENST00000333070 MYO15BQ96JP2 1530 aa29.11■■■□□ 2.25
LCK-201ENST00000333070 ABCC9O60706 1549 aa29.05■■■□□ 2.24
LCK-201ENST00000333070 NACADO15069 1562 aa28.81■■■□□ 2.2
LCK-201ENST00000333070 SCRIBQ14160 1630 aa28.61■■■□□ 2.17
LCK-201ENST00000333070 SUPT5HO00267 1087 aaKnown RBP28.59■■■□□ 2.17
LCK-201ENST00000333070 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
LCK-201ENST00000333070 RSF1Q96T23 1441 aaPredicted RBP27.97■■■□□ 2.07
LCK-201ENST00000333070 UNC13AQ9UPW8 1703 aa27.96■■■□□ 2.07
LCK-201ENST00000333070 CECR2Q9BXF3 1484 aa27.85■■■□□ 2.05
LCK-201ENST00000333070 MROH2BQ7Z745 1585 aa27.72■■■□□ 2.03
LCK-201ENST00000333070 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
LCK-201ENST00000333070 BAZ1AQ9NRL2 1556 aaPredicted RBP27.61■■■□□ 2.01
LCK-201ENST00000333070 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
LCK-201ENST00000333070 WIZO95785 1651 aa27.51■■□□□ 1.99
LCK-201ENST00000333070 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
LCK-201ENST00000333070 HRCP23327 699 aa27.48■■□□□ 1.99
LCK-201ENST00000333070 SMARCA4P51532 1647 aa27.45■■□□□ 1.99
LCK-201ENST00000333070 TOP2AP11388 1531 aaKnown RBP27.2■■□□□ 1.94
LCK-201ENST00000333070 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
LCK-201ENST00000333070 SMARCA2P51531 1590 aa26.98■■□□□ 1.91
LCK-201ENST00000333070 CCDC88BA6NC98 1476 aa26.97■■□□□ 1.91
LCK-201ENST00000333070 ATAD2BQ9ULI0 1458 aa26.93■■□□□ 1.9
LCK-201ENST00000333070 EIF4G1Q04637 1599 aaKnown RBP26.93■■□□□ 1.9
LCK-201ENST00000333070 TRIM41Q8WV44 630 aa26.84■■□□□ 1.89
LCK-201ENST00000333070 PCGF6Q9BYE7 350 aa26.8■■□□□ 1.88
LCK-201ENST00000333070 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
LCK-201ENST00000333070 PPARGC1BQ86YN6 1023 aaKnown RBP26.67■■□□□ 1.86
LCK-201ENST00000333070 NCAPD3P42695 1498 aa26.63■■□□□ 1.85
LCK-201ENST00000333070 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
LCK-201ENST00000333070 PELP1Q8IZL8 1130 aaKnown RBP26.58■■□□□ 1.85
LCK-201ENST00000333070 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
LCK-201ENST00000333070 ABCC8Q09428 1581 aa26.52■■□□□ 1.84
LCK-201ENST00000333070 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
LCK-201ENST00000333070 CC2D2AQ9P2K1 1620 aa26.29■■□□□ 1.8
LCK-201ENST00000333070 WRNQ14191 1432 aaPredicted RBP eCLIP26.28■■□□□ 1.8
LCK-201ENST00000333070 SYNJ1O43426 1573 aa26.18■■□□□ 1.78
LCK-201ENST00000333070 CFTRP13569 1480 aa26.14■■□□□ 1.78
LCK-201ENST00000333070 TRIM26Q12899 539 aaPredicted RBP26.13■■□□□ 1.77
LCK-201ENST00000333070 SOGA1O94964 1423 aa26.12■■□□□ 1.77
LCK-201ENST00000333070 EEA1Q15075 1411 aa26.08■■□□□ 1.77
LCK-201ENST00000333070 TOP2BQ02880 1626 aa26.02■■□□□ 1.76
LCK-201ENST00000333070 ZEB1P37275 1124 aaPredicted RBP26.02■■□□□ 1.76
LCK-201ENST00000333070 RUSC2Q8N2Y8 1516 aa26.01■■□□□ 1.76
LCK-201ENST00000333070 EHMT2Q96KQ7 1210 aa25.99■■□□□ 1.75
LCK-201ENST00000333070 PRDM2Q13029 1718 aa25.99■■□□□ 1.75
LCK-201ENST00000333070 BIVM-ERCC5R4GMW8 1640 aa25.98■■□□□ 1.75
LCK-201ENST00000333070 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
LCK-201ENST00000333070 CSRNP3Q8WYN3 585 aa25.95■■□□□ 1.74
LCK-201ENST00000333070 CUX1P39880 1505 aa25.89■■□□□ 1.73
LCK-201ENST00000333070 SCAF1Q9H7N4 1312 aaKnown RBP25.86■■□□□ 1.73
LCK-201ENST00000333070 TNIKQ9UKE5 1360 aa25.77■■□□□ 1.72
LCK-201ENST00000333070 GOLGA3Q08378 1498 aa25.75■■□□□ 1.71
LCK-201ENST00000333070 KIF21BO75037 1637 aa25.74■■□□□ 1.71
LCK-201ENST00000333070 CEP164Q9UPV0 1460 aa25.71■■□□□ 1.71
LCK-201ENST00000333070 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
LCK-201ENST00000333070 CEP162Q5TB80 1403 aa25.65■■□□□ 1.7
LCK-201ENST00000333070 NESP48681 1621 aa25.64■■□□□ 1.7
LCK-201ENST00000333070 UBTFP17480 764 aaKnown RBP25.63■■□□□ 1.69
LCK-201ENST00000333070 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
LCK-201ENST00000333070 DNAJC5BQ9UF47 199 aa25.61■■□□□ 1.69
LCK-201ENST00000333070 MYT1Q01538 1121 aa25.6■■□□□ 1.69
LCK-201ENST00000333070 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
LCK-201ENST00000333070 RAPGEF2Q9Y4G8 1499 aa25.55■■□□□ 1.68
LCK-201ENST00000333070 PRXQ9BXM0 1461 aa25.53■■□□□ 1.68
LCK-201ENST00000333070 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
LCK-201ENST00000333070 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
LCK-201ENST00000333070 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
LCK-201ENST00000333070 TOPBP1Q92547 1522 aa25.45■■□□□ 1.66
LCK-201ENST00000333070 CUX2O14529 1486 aa25.44■■□□□ 1.66
LCK-201ENST00000333070 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
LCK-201ENST00000333070 CLIP1P30622 1438 aa25.36■■□□□ 1.65
LCK-201ENST00000333070 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
LCK-201ENST00000333070 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
LCK-201ENST00000333070 IGF1RP08069 1367 aa25.36■■□□□ 1.65
LCK-201ENST00000333070 ACIN1Q9UKV3 1341 aaKnown RBP25.34■■□□□ 1.65
LCK-201ENST00000333070 ABCA10Q8WWZ4 1543 aa25.31■■□□□ 1.64
LCK-201ENST00000333070 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
LCK-201ENST00000333070 RAD54L2Q9Y4B4 1467 aa25.3■■□□□ 1.64
LCK-201ENST00000333070 CARMIL1Q5VZK9 1371 aa25.21■■□□□ 1.63
LCK-201ENST00000333070 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.62
LCK-201ENST00000333070 WDR97A6NE52 1622 aa25.19■■□□□ 1.62
LCK-201ENST00000333070 NEUROD1Q13562 356 aa25.18■■□□□ 1.62
LCK-201ENST00000333070 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
LCK-201ENST00000333070 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
LCK-201ENST00000333070 MRC2Q9UBG0 1479 aa25.07■■□□□ 1.6
LCK-201ENST00000333070 CENPBP07199 599 aaPredicted RBP25.07■■□□□ 1.6
LCK-201ENST00000333070 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
LCK-201ENST00000333070 CUL7Q14999 1698 aa25.06■■□□□ 1.6
LCK-201ENST00000333070 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
LCK-201ENST00000333070 GTF3C3Q9Y5Q9 886 aa25.04■■□□□ 1.6
LCK-201ENST00000333070 ARHGAP35Q9NRY4 1499 aa25.02■■□□□ 1.6
LCK-201ENST00000333070 TDRD9Q8NDG6 1382 aaKnown RBP25.02■■□□□ 1.6
LCK-201ENST00000333070 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
LCK-201ENST00000333070 TTBK1Q5TCY1 1321 aaPredicted RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms