RNA–Protein interactions for RNA: ENST00000473233.5

MCF2L2-208, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2L2, Length 4,748 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-208ENST00000473233 NISCHQ9Y2I1 1504 aa29.15■■■□□ 2.26
MCF2L2-208ENST00000473233 DCAF8L2P0C7V8 631 aa28.09■■■□□ 2.09
MCF2L2-208ENST00000473233 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
MCF2L2-208ENST00000473233 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
MCF2L2-208ENST00000473233 EHMT2Q96KQ7 1210 aa25.95■■□□□ 1.74
MCF2L2-208ENST00000473233 PCGF6Q9BYE7 350 aa25.72■■□□□ 1.71
MCF2L2-208ENST00000473233 FAM9AQ8IZU1 332 aaPredicted RBP25.63■■□□□ 1.69
MCF2L2-208ENST00000473233 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
MCF2L2-208ENST00000473233 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
MCF2L2-208ENST00000473233 TTBK1Q5TCY1 1321 aaPredicted RBP25.08■■□□□ 1.61
MCF2L2-208ENST00000473233 APLP2Q06481 763 aa25.07■■□□□ 1.6
MCF2L2-208ENST00000473233 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
MCF2L2-208ENST00000473233 LOC105371045A0A1W2PR82 267 aa24.91■■□□□ 1.58
MCF2L2-208ENST00000473233 HRCP23327 699 aa24.85■■□□□ 1.57
MCF2L2-208ENST00000473233 TRIM26Q12899 539 aaPredicted RBP24.8■■□□□ 1.56
MCF2L2-208ENST00000473233 CCER1Q8TC90 406 aaPredicted RBP24.79■■□□□ 1.56
MCF2L2-208ENST00000473233 UBTFP17480 764 aaKnown RBP24.72■■□□□ 1.55
MCF2L2-208ENST00000473233 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
MCF2L2-208ENST00000473233 PPARGC1BQ86YN6 1023 aaKnown RBP24.68■■□□□ 1.54
MCF2L2-208ENST00000473233 CENPBP07199 599 aaPredicted RBP24.44■■□□□ 1.5
MCF2L2-208ENST00000473233 PELP1Q8IZL8 1130 aaKnown RBP24.42■■□□□ 1.5
MCF2L2-208ENST00000473233 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
MCF2L2-208ENST00000473233 ABCC9O60706 1549 aa24.23■■□□□ 1.47
MCF2L2-208ENST00000473233 ATP1B4Q9UN42 357 aaPredicted RBP24.21■■□□□ 1.47
MCF2L2-208ENST00000473233 YTHDC1Q96MU7 727 aaKnown RBP24.07■■□□□ 1.44
MCF2L2-208ENST00000473233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.02■■□□□ 1.44
MCF2L2-208ENST00000473233 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
MCF2L2-208ENST00000473233 CCDC180Q9P1Z9 1646 aa23.92■■□□□ 1.42
MCF2L2-208ENST00000473233 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
MCF2L2-208ENST00000473233 ITGAEP38570 1179 aa23.82■■□□□ 1.4
MCF2L2-208ENST00000473233 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
MCF2L2-208ENST00000473233 DIEXFQ68CQ4 756 aaKnown RBP23.71■■□□□ 1.39
MCF2L2-208ENST00000473233 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
MCF2L2-208ENST00000473233 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.37
MCF2L2-208ENST00000473233 CSRNP3Q8WYN3 585 aa23.57■■□□□ 1.36
MCF2L2-208ENST00000473233 NEFLP07196 543 aa23.55■■□□□ 1.36
MCF2L2-208ENST00000473233 RSF1Q96T23 1441 aaPredicted RBP23.4■■□□□ 1.34
MCF2L2-208ENST00000473233 ERICH6Q7L0X2 663 aa23.34■■□□□ 1.33
MCF2L2-208ENST00000473233 FAM50AQ14320 339 aaKnown RBP23.3■■□□□ 1.32
MCF2L2-208ENST00000473233 ZNF316A6NFI3 1004 aaPredicted RBP23.29■■□□□ 1.32
MCF2L2-208ENST00000473233 GTF3C3Q9Y5Q9 886 aa23.24■■□□□ 1.31
MCF2L2-208ENST00000473233 MYT1Q01538 1121 aa23.19■■□□□ 1.3
MCF2L2-208ENST00000473233 NEUROD1Q13562 356 aa23.14■■□□□ 1.3
MCF2L2-208ENST00000473233 ACIN1Q9UKV3 1341 aaKnown RBP23.12■■□□□ 1.29
MCF2L2-208ENST00000473233 POLR3GLQ9BT43 218 aa23.1■■□□□ 1.29
MCF2L2-208ENST00000473233 P3H3Q8IVL6 736 aa23.01■■□□□ 1.27
MCF2L2-208ENST00000473233 CNGB1Q14028 1251 aaPredicted RBP23■■□□□ 1.27
MCF2L2-208ENST00000473233 NACADO15069 1562 aa22.98■■□□□ 1.27
MCF2L2-208ENST00000473233 TRIM52Q96A61 297 aa22.96■■□□□ 1.27
MCF2L2-208ENST00000473233 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
MCF2L2-208ENST00000473233 CECR2Q9BXF3 1484 aa22.93■■□□□ 1.26
MCF2L2-208ENST00000473233 CEP162Q5TB80 1403 aa22.85■■□□□ 1.25
MCF2L2-208ENST00000473233 ANP32CO43423 234 aa22.82■■□□□ 1.24
MCF2L2-208ENST00000473233 CLIP1P30622 1438 aa22.82■■□□□ 1.24
MCF2L2-208ENST00000473233 EEA1Q15075 1411 aa22.81■■□□□ 1.24
MCF2L2-208ENST00000473233 BCANQ96GW7 911 aa22.77■■□□□ 1.24
MCF2L2-208ENST00000473233 MYT1LQ9UL68 1186 aa22.77■■□□□ 1.24
MCF2L2-208ENST00000473233 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
MCF2L2-208ENST00000473233 GOLGA3Q08378 1498 aa22.73■■□□□ 1.23
MCF2L2-208ENST00000473233 TNIKQ9UKE5 1360 aa22.72■■□□□ 1.23
MCF2L2-208ENST00000473233 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
MCF2L2-208ENST00000473233 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
MCF2L2-208ENST00000473233 ARID3CA6NKF2 412 aa22.68■■□□□ 1.22
MCF2L2-208ENST00000473233 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
MCF2L2-208ENST00000473233 MIER1Q8N108 512 aa22.62■■□□□ 1.21
MCF2L2-208ENST00000473233 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
MCF2L2-208ENST00000473233 FBLN2P98095 1184 aa22.61■■□□□ 1.21
MCF2L2-208ENST00000473233 SOGA1O94964 1423 aa22.56■■□□□ 1.2
MCF2L2-208ENST00000473233 DDX10Q13206 875 aaKnown RBP22.55■■□□□ 1.2
MCF2L2-208ENST00000473233 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
MCF2L2-208ENST00000473233 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
MCF2L2-208ENST00000473233 TONSLQ96HA7 1378 aa22.51■■□□□ 1.19
MCF2L2-208ENST00000473233 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.18
MCF2L2-208ENST00000473233 DAXXQ9UER7 740 aaPredicted RBP22.43■■□□□ 1.18
MCF2L2-208ENST00000473233 ZNF777Q9ULD5 760 aaPredicted RBP22.42■■□□□ 1.18
MCF2L2-208ENST00000473233 CLSPNQ9HAW4 1339 aa22.42■■□□□ 1.18
MCF2L2-208ENST00000473233 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
MCF2L2-208ENST00000473233 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
MCF2L2-208ENST00000473233 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
MCF2L2-208ENST00000473233 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
MCF2L2-208ENST00000473233 FKBP8Q14318 412 aa22.37■■□□□ 1.17
MCF2L2-208ENST00000473233 MTUS2Q5JR59 1369 aa22.36■■□□□ 1.17
MCF2L2-208ENST00000473233 WIZO95785 1651 aa22.35■■□□□ 1.17
MCF2L2-208ENST00000473233 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
MCF2L2-208ENST00000473233 HIRIP3Q9BW71 556 aaPredicted RBP22.32■■□□□ 1.16
MCF2L2-208ENST00000473233 HNRNPUQ00839 825 aaKnown RBP eCLIP22.29■■□□□ 1.16
MCF2L2-208ENST00000473233 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.14
MCF2L2-208ENST00000473233 RTL5Q5HYW3 569 aaPredicted RBP22.19■■□□□ 1.14
MCF2L2-208ENST00000473233 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
MCF2L2-208ENST00000473233 FAM9BQ8IZU0 186 aa22.18■■□□□ 1.14
MCF2L2-208ENST00000473233 RRP7BPQ9NSQ0 103 aa22.17■■□□□ 1.14
MCF2L2-208ENST00000473233 CCNB3Q8WWL7 1395 aa22.13■■□□□ 1.13
MCF2L2-208ENST00000473233 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
MCF2L2-208ENST00000473233 KANK4Q5T7N3 995 aaPredicted RBP22.11■■□□□ 1.13
MCF2L2-208ENST00000473233 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
MCF2L2-208ENST00000473233 EIF4G2P78344 907 aaKnown RBP eCLIP22.06■■□□□ 1.12
MCF2L2-208ENST00000473233 CUX2O14529 1486 aa22.04■■□□□ 1.12
MCF2L2-208ENST00000473233 MRS2Q9HD23 443 aa22.04■■□□□ 1.12
MCF2L2-208ENST00000473233 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
MCF2L2-208ENST00000473233 SMARCA2P51531 1590 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms