Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.22□□□□□ -0.13
CDRT1O95170 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.22□□□□□ -0.13
CDRT1O95170 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 ELK2BP-201ENST00000415014 1224 ntBASIC14.22□□□□□ -0.13
CDRT1O95170 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.22□□□□□ -0.13
CDRT1O95170 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.22□□□□□ -0.13
CDRT1O95170 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.22□□□□□ -0.13
CDRT1O95170 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CDRT1O95170 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.22□□□□□ -0.13
CDRT1O95170 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CDRT1O95170 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDRT1O95170 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDRT1O95170 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.22□□□□□ -0.13
CDRT1O95170 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDRT1O95170 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.21□□□□□ -0.13
CDRT1O95170 AJ011931.1-201ENST00000618749 2492 ntBASIC14.21□□□□□ -0.13
CDRT1O95170 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.21□□□□□ -0.13
CDRT1O95170 AC009090.5-201ENST00000624886 2285 ntBASIC14.21□□□□□ -0.13
CDRT1O95170 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDRT1O95170 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDRT1O95170 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.21□□□□□ -0.13
CDRT1O95170 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.21□□□□□ -0.13
CDRT1O95170 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDRT1O95170 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.21□□□□□ -0.13
CDRT1O95170 UPK3BP1-201ENST00000428678 509 ntBASIC14.21□□□□□ -0.13
CDRT1O95170 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.21□□□□□ -0.13
CDRT1O95170 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.21□□□□□ -0.13
CDRT1O95170 HCG4P8-203ENST00000443049 980 ntBASIC14.21□□□□□ -0.13
CDRT1O95170 SCARNA2-201ENST00000458748 420 ntBASIC14.21□□□□□ -0.13
CDRT1O95170 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDRT1O95170 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 AL160237.2-201ENST00000556165 472 ntBASIC14.21□□□□□ -0.13
CDRT1O95170 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDRT1O95170 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDRT1O95170 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CDRT1O95170 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDRT1O95170 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDRT1O95170 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.21□□□□□ -0.14
CDRT1O95170 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.21□□□□□ -0.14
CDRT1O95170 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDRT1O95170 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CDRT1O95170 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDRT1O95170 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms