RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.52
TMEM220-202ENST00000455996 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
TMEM220-202ENST00000455996 ZCCHC6Q5VYS8 1495 aaKnown RBP31.13■■■□□ 2.57
TMEM220-202ENST00000455996 DCAF1Q9Y4B6 1507 aa30.75■■■□□ 2.51
TMEM220-202ENST00000455996 ABCC9O60706 1549 aa30.63■■■□□ 2.49
TMEM220-202ENST00000455996 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
TMEM220-202ENST00000455996 DCAF8L2P0C7V8 631 aa30.41■■■□□ 2.46
TMEM220-202ENST00000455996 NACADO15069 1562 aa30.22■■■□□ 2.43
TMEM220-202ENST00000455996 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
TMEM220-202ENST00000455996 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
TMEM220-202ENST00000455996 SCRIBQ14160 1630 aa29.65■■■□□ 2.34
TMEM220-202ENST00000455996 UNC13AQ9UPW8 1703 aa29.25■■■□□ 2.27
TMEM220-202ENST00000455996 BICRAQ9NZM4 1560 aa29.06■■■□□ 2.24
TMEM220-202ENST00000455996 PABPN1Q86U42 306 aaKnown RBP eCLIP28.82■■■□□ 2.2
TMEM220-202ENST00000455996 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.19
TMEM220-202ENST00000455996 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
TMEM220-202ENST00000455996 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
TMEM220-202ENST00000455996 BAZ1AQ9NRL2 1556 aaPredicted RBP28.62■■■□□ 2.17
TMEM220-202ENST00000455996 MROH2BQ7Z745 1585 aa28.59■■■□□ 2.17
TMEM220-202ENST00000455996 SMARCA4P51532 1647 aa28.49■■■□□ 2.15
TMEM220-202ENST00000455996 WIZO95785 1651 aa28.3■■■□□ 2.12
TMEM220-202ENST00000455996 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
TMEM220-202ENST00000455996 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
TMEM220-202ENST00000455996 ATAD2BQ9ULI0 1458 aa28.09■■■□□ 2.09
TMEM220-202ENST00000455996 TOP2AP11388 1531 aaKnown RBP28.09■■■□□ 2.09
TMEM220-202ENST00000455996 SMARCA2P51531 1590 aa28.07■■■□□ 2.08
TMEM220-202ENST00000455996 NCAPD3P42695 1498 aa27.91■■■□□ 2.06
TMEM220-202ENST00000455996 BAZ1BQ9UIG0 1483 aaKnown RBP27.87■■■□□ 2.05
TMEM220-202ENST00000455996 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
TMEM220-202ENST00000455996 CCDC88BA6NC98 1476 aa27.77■■■□□ 2.04
TMEM220-202ENST00000455996 CC2D2AQ9P2K1 1620 aa27.75■■■□□ 2.03
TMEM220-202ENST00000455996 CHIC1Q5VXU3 224 aa27.58■■■□□ 2
TMEM220-202ENST00000455996 CFTRP13569 1480 aa27.23■■□□□ 1.95
TMEM220-202ENST00000455996 CADPSQ9ULU8 1353 aa27.15■■□□□ 1.94
TMEM220-202ENST00000455996 DNAJC5BQ9UF47 199 aa27.15■■□□□ 1.94
TMEM220-202ENST00000455996 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
TMEM220-202ENST00000455996 ABCC8Q09428 1581 aa27.06■■□□□ 1.92
TMEM220-202ENST00000455996 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
TMEM220-202ENST00000455996 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
TMEM220-202ENST00000455996 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
TMEM220-202ENST00000455996 NESP48681 1621 aa26.86■■□□□ 1.89
TMEM220-202ENST00000455996 SYNJ1O43426 1573 aa26.86■■□□□ 1.89
TMEM220-202ENST00000455996 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
TMEM220-202ENST00000455996 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
TMEM220-202ENST00000455996 BIVM-ERCC5R4GMW8 1640 aa26.78■■□□□ 1.88
TMEM220-202ENST00000455996 CUX1P39880 1505 aa26.75■■□□□ 1.87
TMEM220-202ENST00000455996 PDS5BQ9NTI5 1447 aa26.72■■□□□ 1.87
TMEM220-202ENST00000455996 CEP164Q9UPV0 1460 aa26.64■■□□□ 1.86
TMEM220-202ENST00000455996 EEA1Q15075 1411 aa26.59■■□□□ 1.85
TMEM220-202ENST00000455996 SOGA1O94964 1423 aa26.57■■□□□ 1.84
TMEM220-202ENST00000455996 DNMBPQ6XZF7 1577 aa26.57■■□□□ 1.84
TMEM220-202ENST00000455996 AEBP2Q6ZN18 517 aaPredicted RBP26.53■■□□□ 1.84
TMEM220-202ENST00000455996 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
TMEM220-202ENST00000455996 TOPBP1Q92547 1522 aa26.52■■□□□ 1.84
TMEM220-202ENST00000455996 FAM9AQ8IZU1 332 aaPredicted RBP26.5■■□□□ 1.83
TMEM220-202ENST00000455996 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
TMEM220-202ENST00000455996 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
TMEM220-202ENST00000455996 FGD5Q6ZNL6 1462 aa26.46■■□□□ 1.83
TMEM220-202ENST00000455996 LOC105371045A0A1W2PR82 267 aa26.42■■□□□ 1.82
TMEM220-202ENST00000455996 MRC2Q9UBG0 1479 aa26.39■■□□□ 1.81
TMEM220-202ENST00000455996 CSRNP3Q8WYN3 585 aa26.39■■□□□ 1.81
TMEM220-202ENST00000455996 POLA1P09884 1462 aaPredicted RBP26.37■■□□□ 1.81
TMEM220-202ENST00000455996 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
TMEM220-202ENST00000455996 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
TMEM220-202ENST00000455996 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
TMEM220-202ENST00000455996 WDR62O43379 1518 aa26.27■■□□□ 1.8
TMEM220-202ENST00000455996 CUX2O14529 1486 aa26.25■■□□□ 1.79
TMEM220-202ENST00000455996 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
TMEM220-202ENST00000455996 KIF21BO75037 1637 aa26.22■■□□□ 1.79
TMEM220-202ENST00000455996 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.78
TMEM220-202ENST00000455996 WDR97A6NE52 1622 aa26.18■■□□□ 1.78
TMEM220-202ENST00000455996 GOLGA3Q08378 1498 aa26.16■■□□□ 1.78
TMEM220-202ENST00000455996 PRXQ9BXM0 1461 aa26.16■■□□□ 1.78
TMEM220-202ENST00000455996 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.78
TMEM220-202ENST00000455996 IGF1RP08069 1367 aa26.13■■□□□ 1.77
TMEM220-202ENST00000455996 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
TMEM220-202ENST00000455996 TNIKQ9UKE5 1360 aa26.08■■□□□ 1.77
TMEM220-202ENST00000455996 IFT140Q96RY7 1462 aa26.06■■□□□ 1.76
TMEM220-202ENST00000455996 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
TMEM220-202ENST00000455996 RAPGEF2Q9Y4G8 1499 aa26.05■■□□□ 1.76
TMEM220-202ENST00000455996 EHMT2Q96KQ7 1210 aa26.03■■□□□ 1.76
TMEM220-202ENST00000455996 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
TMEM220-202ENST00000455996 GAPVD1Q14C86 1478 aa25.99■■□□□ 1.75
TMEM220-202ENST00000455996 CARMIL1Q5VZK9 1371 aa25.96■■□□□ 1.75
TMEM220-202ENST00000455996 UBTFP17480 764 aaKnown RBP25.94■■□□□ 1.74
TMEM220-202ENST00000455996 CUL7Q14999 1698 aa25.92■■□□□ 1.74
TMEM220-202ENST00000455996 CEP162Q5TB80 1403 aa25.88■■□□□ 1.73
TMEM220-202ENST00000455996 ZNF608Q9ULD9 1512 aaPredicted RBP25.86■■□□□ 1.73
TMEM220-202ENST00000455996 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
TMEM220-202ENST00000455996 GRIN2BQ13224 1484 aa25.83■■□□□ 1.73
TMEM220-202ENST00000455996 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
TMEM220-202ENST00000455996 EIF4G3O43432 1585 aaKnown RBP25.77■■□□□ 1.72
TMEM220-202ENST00000455996 FHAD1B1AJZ9 1412 aa25.74■■□□□ 1.71
TMEM220-202ENST00000455996 ADAMTS12P58397 1594 aa25.72■■□□□ 1.71
TMEM220-202ENST00000455996 CLIP1P30622 1438 aa25.71■■□□□ 1.71
TMEM220-202ENST00000455996 MAGI1Q96QZ7 1491 aaPredicted RBP25.64■■□□□ 1.69
TMEM220-202ENST00000455996 SNAPC4Q5SXM2 1469 aa25.63■■□□□ 1.69
TMEM220-202ENST00000455996 CTTNBP2Q8WZ74 1663 aa25.55■■□□□ 1.68
TMEM220-202ENST00000455996 SYNJ2O15056 1496 aa25.53■■□□□ 1.68
TMEM220-202ENST00000455996 ARHGAP35Q9NRY4 1499 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms