Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 AL589739.1-201ENST00000607720 493 ntBASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PARPBPQ9NWS1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 HLA-V-204ENST00000476601 1289 ntBASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 AC026691.1-201ENST00000602502 2017 ntBASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 AC023824.1-201ENST00000562945 2975 ntBASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PARPBPQ9NWS1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms