Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 FO393414.2-201ENST00000405153 598 ntBASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 MIR3197-201ENST00000582241 73 ntBASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH19Q8TAB3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 CNN2P2-201ENST00000443536 909 ntBASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 CNN2P3-201ENST00000450201 906 ntBASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 AC067863.1-201ENST00000494933 530 ntBASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 SPCS2P1-201ENST00000561636 679 ntBASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 AC005498.2-205ENST00000593218 784 ntBASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 AC092364.2-202ENST00000597012 1073 ntBASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 AL136317.3-201ENST00000618497 906 ntBASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH19Q8TAB3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 AL080243.2-201ENST00000418783 582 ntBASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 AC015911.4-201ENST00000588022 1070 ntBASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 AL589739.1-201ENST00000607720 493 ntBASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms