Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DRAP01903 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
HLA-DRAP01903 AC005702.4-201ENST00000618393 416 ntBASIC17.1■□□□□ 0.33
HLA-DRAP01903 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.1■□□□□ 0.33
HLA-DRAP01903 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DRAP01903 AC087499.5-201ENST00000452760 1342 ntBASIC17.1■□□□□ 0.33
HLA-DRAP01903 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HLA-DRAP01903 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DRAP01903 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DRAP01903 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DRAP01903 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DRAP01903 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DRAP01903 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DRAP01903 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DRAP01903 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DRAP01903 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DRAP01903 AL139384.1-201ENST00000612143 3047 ntBASIC17.1■□□□□ 0.33
HLA-DRAP01903 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DRAP01903 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 CICP6-201ENST00000457191 2729 ntBASIC17.09■□□□□ 0.33
HLA-DRAP01903 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 AC092127.1-201ENST00000567093 3455 ntBASIC17.09■□□□□ 0.33
HLA-DRAP01903 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DRAP01903 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DRAP01903 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.09■□□□□ 0.33
HLA-DRAP01903 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DRAP01903 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.08■□□□□ 0.33
HLA-DRAP01903 AC092850.2-201ENST00000623821 2697 ntBASIC17.08■□□□□ 0.33
HLA-DRAP01903 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-DRAP01903 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DRAP01903 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DRAP01903 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DRAP01903 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-DRAP01903 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DRAP01903 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.08■□□□□ 0.33
HLA-DRAP01903 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DRAP01903 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HLA-DRAP01903 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DRAP01903 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DRAP01903 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DRAP01903 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DRAP01903 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DRAP01903 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 AC074338.1-201ENST00000416825 156 ntBASIC17.08■□□□□ 0.32
HLA-DRAP01903 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DRAP01903 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DRAP01903 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DRAP01903 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DRAP01903 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms