RNA–Protein interactions for RNA: ENST00000639739.1

LOX-206, Transcript of lysyl oxidase, humanhuman

TSL 5 BASIC

Gene LOX, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOX-206ENST00000639739 NISCHQ9Y2I1 1504 aa37.25■■■■□ 3.55
LOX-206ENST00000639739 ABCC9O60706 1549 aa33.36■■■□□ 2.93
LOX-206ENST00000639739 CCDC180Q9P1Z9 1646 aa33.33■■■□□ 2.93
LOX-206ENST00000639739 RB1CC1Q8TDY2 1594 aa31.74■■■□□ 2.67
LOX-206ENST00000639739 NACADO15069 1562 aa31.54■■■□□ 2.64
LOX-206ENST00000639739 DCAF8L2P0C7V8 631 aa31.53■■■□□ 2.64
LOX-206ENST00000639739 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
LOX-206ENST00000639739 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.57
LOX-206ENST00000639739 MYO15BQ96JP2 1530 aa31.11■■■□□ 2.57
LOX-206ENST00000639739 UNC13AQ9UPW8 1703 aa30.94■■■□□ 2.54
LOX-206ENST00000639739 ZCCHC6Q5VYS8 1495 aaKnown RBP30.87■■■□□ 2.53
LOX-206ENST00000639739 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
LOX-206ENST00000639739 DCAF1Q9Y4B6 1507 aa30.75■■■□□ 2.51
LOX-206ENST00000639739 SCRIBQ14160 1630 aa30.44■■■□□ 2.46
LOX-206ENST00000639739 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
LOX-206ENST00000639739 CC2D2AQ9P2K1 1620 aa30.09■■■□□ 2.41
LOX-206ENST00000639739 EIF4G1Q04637 1599 aaKnown RBP30.04■■■□□ 2.4
LOX-206ENST00000639739 CECR2Q9BXF3 1484 aa30.03■■■□□ 2.4
LOX-206ENST00000639739 NCAPD3P42695 1498 aa29.13■■■□□ 2.25
LOX-206ENST00000639739 ATAD2BQ9ULI0 1458 aa29.06■■■□□ 2.24
LOX-206ENST00000639739 SMARCA4P51532 1647 aa29.02■■■□□ 2.24
LOX-206ENST00000639739 SMARCA2P51531 1590 aa28.97■■■□□ 2.23
LOX-206ENST00000639739 BAZ1AQ9NRL2 1556 aaPredicted RBP28.91■■■□□ 2.22
LOX-206ENST00000639739 HMGXB3Q12766 1538 aa28.9■■■□□ 2.22
LOX-206ENST00000639739 ERCC6Q03468 1493 aa28.81■■■□□ 2.2
LOX-206ENST00000639739 BAZ1BQ9UIG0 1483 aaKnown RBP28.8■■■□□ 2.2
LOX-206ENST00000639739 PEG3Q9GZU2 1588 aa28.72■■■□□ 2.19
LOX-206ENST00000639739 MROH2BQ7Z745 1585 aa28.71■■■□□ 2.19
LOX-206ENST00000639739 CUX2O14529 1486 aa28.68■■■□□ 2.18
LOX-206ENST00000639739 NESP48681 1621 aa28.66■■■□□ 2.18
LOX-206ENST00000639739 DNAJC5Q9H3Z4 198 aa28.62■■■□□ 2.17
LOX-206ENST00000639739 LAMC3Q9Y6N6 1575 aa28.44■■■□□ 2.14
LOX-206ENST00000639739 WIZO95785 1651 aa28.35■■■□□ 2.13
LOX-206ENST00000639739 PDS5BQ9NTI5 1447 aa28.33■■■□□ 2.13
LOX-206ENST00000639739 THOC2Q8NI27 1593 aaKnown RBP28.3■■■□□ 2.12
LOX-206ENST00000639739 CADPSQ9ULU8 1353 aa28.28■■■□□ 2.12
LOX-206ENST00000639739 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
LOX-206ENST00000639739 RSF1Q96T23 1441 aaPredicted RBP28.16■■■□□ 2.1
LOX-206ENST00000639739 MRC2Q9UBG0 1479 aa28.06■■■□□ 2.08
LOX-206ENST00000639739 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
LOX-206ENST00000639739 CEP164Q9UPV0 1460 aa27.96■■■□□ 2.07
LOX-206ENST00000639739 WDR62O43379 1518 aa27.95■■■□□ 2.07
LOX-206ENST00000639739 FANCD2Q9BXW9 1451 aa27.95■■■□□ 2.06
LOX-206ENST00000639739 CFTRP13569 1480 aa27.94■■■□□ 2.06
LOX-206ENST00000639739 SUPT5HO00267 1087 aaKnown RBP27.81■■■□□ 2.04
LOX-206ENST00000639739 CCDC88BA6NC98 1476 aa27.71■■■□□ 2.03
LOX-206ENST00000639739 URB2Q14146 1524 aaKnown RBP27.7■■■□□ 2.02
LOX-206ENST00000639739 PRDM2Q13029 1718 aa27.58■■■□□ 2
LOX-206ENST00000639739 OSCARQ8IYS5 282 aa27.45■■□□□ 1.99
LOX-206ENST00000639739 TRIM41Q8WV44 630 aa27.45■■□□□ 1.98
LOX-206ENST00000639739 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
LOX-206ENST00000639739 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
LOX-206ENST00000639739 ABCC8Q09428 1581 aa27.36■■□□□ 1.97
LOX-206ENST00000639739 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
LOX-206ENST00000639739 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
LOX-206ENST00000639739 EIF4G3O43432 1585 aaKnown RBP27.17■■□□□ 1.94
LOX-206ENST00000639739 AQRO60306 1485 aaKnown RBP eCLIP27.14■■□□□ 1.94
LOX-206ENST00000639739 POLA1P09884 1462 aaPredicted RBP27.14■■□□□ 1.93
LOX-206ENST00000639739 TARBP1Q13395 1621 aaKnown RBP27.13■■□□□ 1.93
LOX-206ENST00000639739 RAD54L2Q9Y4B4 1467 aa27.06■■□□□ 1.92
LOX-206ENST00000639739 SOGA1O94964 1423 aa27.05■■□□□ 1.92
LOX-206ENST00000639739 RIMBP3CA6NJZ7 1639 aa27.01■■□□□ 1.91
LOX-206ENST00000639739 RIMBP3BA6NNM3 1639 aa27.01■■□□□ 1.91
LOX-206ENST00000639739 RIMBP3Q9UFD9 1639 aa27.01■■□□□ 1.91
LOX-206ENST00000639739 FBLN2P98095 1184 aa27.01■■□□□ 1.91
LOX-206ENST00000639739 TDRD9Q8NDG6 1382 aaKnown RBP27■■□□□ 1.91
LOX-206ENST00000639739 FGD5Q6ZNL6 1462 aa26.99■■□□□ 1.91
LOX-206ENST00000639739 CUX1P39880 1505 aa26.97■■□□□ 1.91
LOX-206ENST00000639739 ARHGEF11O15085 1522 aa26.95■■□□□ 1.91
LOX-206ENST00000639739 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
LOX-206ENST00000639739 CHD1O14646 1710 aa26.93■■□□□ 1.9
LOX-206ENST00000639739 SNAPC4Q5SXM2 1469 aa26.85■■□□□ 1.89
LOX-206ENST00000639739 WDR97A6NE52 1622 aa26.85■■□□□ 1.89
LOX-206ENST00000639739 CYB5RLQ6IPT4 315 aa26.82■■□□□ 1.88
LOX-206ENST00000639739 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
LOX-206ENST00000639739 GRIN2BQ13224 1484 aa26.79■■□□□ 1.88
LOX-206ENST00000639739 MAGI1Q96QZ7 1491 aaPredicted RBP26.77■■□□□ 1.88
LOX-206ENST00000639739 GAPVD1Q14C86 1478 aa26.71■■□□□ 1.87
LOX-206ENST00000639739 ARAP1Q96P48 1450 aa26.7■■□□□ 1.86
LOX-206ENST00000639739 SYNJ2O15056 1496 aa26.68■■□□□ 1.86
LOX-206ENST00000639739 ABCA10Q8WWZ4 1543 aa26.68■■□□□ 1.86
LOX-206ENST00000639739 SYNJ1O43426 1573 aa26.66■■□□□ 1.86
LOX-206ENST00000639739 CLASP1Q7Z460 1538 aa26.65■■□□□ 1.86
LOX-206ENST00000639739 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
LOX-206ENST00000639739 PBRM1Q86U86 1689 aa26.62■■□□□ 1.85
LOX-206ENST00000639739 ABCA5Q8WWZ7 1642 aa26.59■■□□□ 1.85
LOX-206ENST00000639739 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
LOX-206ENST00000639739 BIVM-ERCC5R4GMW8 1640 aa26.51■■□□□ 1.84
LOX-206ENST00000639739 TRHP20396 242 aaPredicted RBP26.51■■□□□ 1.83
LOX-206ENST00000639739 GRIN2AQ12879 1464 aa26.44■■□□□ 1.82
LOX-206ENST00000639739 ADAMTS12P58397 1594 aa26.4■■□□□ 1.82
LOX-206ENST00000639739 FHAD1B1AJZ9 1412 aa26.38■■□□□ 1.81
LOX-206ENST00000639739 NUP160Q12769 1436 aa26.34■■□□□ 1.81
LOX-206ENST00000639739 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
LOX-206ENST00000639739 CEP170Q5SW79 1584 aa26.31■■□□□ 1.8
LOX-206ENST00000639739 ERCC6L2Q5T890 1561 aa26.26■■□□□ 1.79
LOX-206ENST00000639739 SHROOM2Q13796 1616 aa26.17■■□□□ 1.78
LOX-206ENST00000639739 JPH4Q96JJ6 628 aa26.13■■□□□ 1.77
LOX-206ENST00000639739 PRG4Q92954 1404 aaPredicted RBP26.12■■□□□ 1.77
LOX-206ENST00000639739 KIF27Q86VH2 1401 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms