Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 AC136632.2-201ENST00000512891 861 ntBASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 AC087641.1-201ENST00000557561 1021 ntBASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMBOX1Q6NT76 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 U82695.1-201ENST00000635752 1889 ntBASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 HAUS4P1-201ENST00000406739 1145 ntBASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 ELK2BP-201ENST00000415014 1224 ntBASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 AC106730.1-201ENST00000566722 1090 ntBASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 AC005593.1-201ENST00000624894 515 ntBASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMBOX1Q6NT76 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms