RNA–Protein interactions for RNA: ENST00000430676.6

RMDN1-202, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 2 BASIC

Gene RMDN1, Length 1,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-202ENST00000430676 NISCHQ9Y2I1 1504 aa42.41■■■■■ 4.38
RMDN1-202ENST00000430676 CCDC180Q9P1Z9 1646 aa37.76■■■■□ 3.63
RMDN1-202ENST00000430676 ABCC9O60706 1549 aa37.18■■■■□ 3.54
RMDN1-202ENST00000430676 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
RMDN1-202ENST00000430676 DCAF8L2P0C7V8 631 aa35.54■■■■□ 3.28
RMDN1-202ENST00000430676 NACADO15069 1562 aa35.53■■■■□ 3.28
RMDN1-202ENST00000430676 ZCCHC6Q5VYS8 1495 aaKnown RBP35.29■■■■□ 3.24
RMDN1-202ENST00000430676 MYO15BQ96JP2 1530 aa35.23■■■■□ 3.23
RMDN1-202ENST00000430676 DCAF1Q9Y4B6 1507 aa35.03■■■■□ 3.2
RMDN1-202ENST00000430676 UNC13AQ9UPW8 1703 aa34.86■■■■□ 3.17
RMDN1-202ENST00000430676 PABPN1Q86U42 306 aaKnown RBP eCLIP34.72■■■■□ 3.15
RMDN1-202ENST00000430676 BICRAQ9NZM4 1560 aa34.6■■■■□ 3.13
RMDN1-202ENST00000430676 SCRIBQ14160 1630 aa34.51■■■■□ 3.11
RMDN1-202ENST00000430676 DNAJC5BQ9UF47 199 aa34.3■■■■□ 3.08
RMDN1-202ENST00000430676 SHROOM4Q9ULL8 1493 aa34.13■■■■□ 3.05
RMDN1-202ENST00000430676 EIF4G1Q04637 1599 aaKnown RBP33.68■■■□□ 2.98
RMDN1-202ENST00000430676 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
RMDN1-202ENST00000430676 CECR2Q9BXF3 1484 aa33.4■■■□□ 2.94
RMDN1-202ENST00000430676 SMARCA4P51532 1647 aa32.95■■■□□ 2.87
RMDN1-202ENST00000430676 BAZ1AQ9NRL2 1556 aaPredicted RBP32.87■■■□□ 2.85
RMDN1-202ENST00000430676 ATAD2BQ9ULI0 1458 aa32.81■■■□□ 2.84
RMDN1-202ENST00000430676 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
RMDN1-202ENST00000430676 SMARCA2P51531 1590 aa32.74■■■□□ 2.83
RMDN1-202ENST00000430676 MROH2BQ7Z745 1585 aa32.71■■■□□ 2.83
RMDN1-202ENST00000430676 HMGXB3Q12766 1538 aa32.62■■■□□ 2.81
RMDN1-202ENST00000430676 PEG3Q9GZU2 1588 aa32.6■■■□□ 2.81
RMDN1-202ENST00000430676 BAZ1BQ9UIG0 1483 aaKnown RBP32.54■■■□□ 2.8
RMDN1-202ENST00000430676 WIZO95785 1651 aa32.36■■■□□ 2.77
RMDN1-202ENST00000430676 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.75
RMDN1-202ENST00000430676 NESP48681 1621 aa32.13■■■□□ 2.73
RMDN1-202ENST00000430676 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
RMDN1-202ENST00000430676 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
RMDN1-202ENST00000430676 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
RMDN1-202ENST00000430676 CADPSQ9ULU8 1353 aa31.84■■■□□ 2.69
RMDN1-202ENST00000430676 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
RMDN1-202ENST00000430676 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
RMDN1-202ENST00000430676 CUX2O14529 1486 aa31.72■■■□□ 2.67
RMDN1-202ENST00000430676 THOC2Q8NI27 1593 aaKnown RBP31.66■■■□□ 2.66
RMDN1-202ENST00000430676 CFTRP13569 1480 aa31.62■■■□□ 2.65
RMDN1-202ENST00000430676 CCDC88BA6NC98 1476 aa31.61■■■□□ 2.65
RMDN1-202ENST00000430676 FANCD2Q9BXW9 1451 aa31.49■■■□□ 2.63
RMDN1-202ENST00000430676 CEP164Q9UPV0 1460 aa31.46■■■□□ 2.63
RMDN1-202ENST00000430676 MRC2Q9UBG0 1479 aa31.46■■■□□ 2.63
RMDN1-202ENST00000430676 PRDM2Q13029 1718 aa31.36■■■□□ 2.61
RMDN1-202ENST00000430676 WDR62O43379 1518 aa31.36■■■□□ 2.61
RMDN1-202ENST00000430676 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
RMDN1-202ENST00000430676 URB2Q14146 1524 aaKnown RBP31.21■■■□□ 2.59
RMDN1-202ENST00000430676 TOPBP1Q92547 1522 aa30.98■■■□□ 2.55
RMDN1-202ENST00000430676 DNAJC5Q9H3Z4 198 aa30.97■■■□□ 2.55
RMDN1-202ENST00000430676 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
RMDN1-202ENST00000430676 ABCC8Q09428 1581 aa30.9■■■□□ 2.54
RMDN1-202ENST00000430676 IFT140Q96RY7 1462 aa30.8■■■□□ 2.52
RMDN1-202ENST00000430676 ZNF608Q9ULD9 1512 aaPredicted RBP30.73■■■□□ 2.51
RMDN1-202ENST00000430676 POLA1P09884 1462 aaPredicted RBP30.7■■■□□ 2.51
RMDN1-202ENST00000430676 CUX1P39880 1505 aa30.7■■■□□ 2.51
RMDN1-202ENST00000430676 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
RMDN1-202ENST00000430676 FGD5Q6ZNL6 1462 aa30.61■■■□□ 2.49
RMDN1-202ENST00000430676 RAD54L2Q9Y4B4 1467 aa30.6■■■□□ 2.49
RMDN1-202ENST00000430676 EIF4G3O43432 1585 aaKnown RBP30.59■■■□□ 2.49
RMDN1-202ENST00000430676 SOGA1O94964 1423 aa30.56■■■□□ 2.48
RMDN1-202ENST00000430676 AQRO60306 1485 aaKnown RBP eCLIP30.53■■■□□ 2.48
RMDN1-202ENST00000430676 TDRD9Q8NDG6 1382 aaKnown RBP30.43■■■□□ 2.46
RMDN1-202ENST00000430676 WRNQ14191 1432 aaPredicted RBP eCLIP30.4■■■□□ 2.46
RMDN1-202ENST00000430676 SYNJ1O43426 1573 aa30.38■■■□□ 2.45
RMDN1-202ENST00000430676 OSCARQ8IYS5 282 aa30.38■■■□□ 2.45
RMDN1-202ENST00000430676 WDR97A6NE52 1622 aa30.36■■■□□ 2.45
RMDN1-202ENST00000430676 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
RMDN1-202ENST00000430676 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
RMDN1-202ENST00000430676 ABCA10Q8WWZ4 1543 aa30.28■■■□□ 2.44
RMDN1-202ENST00000430676 CHD1O14646 1710 aa30.24■■■□□ 2.43
RMDN1-202ENST00000430676 SNAPC4Q5SXM2 1469 aa30.24■■■□□ 2.43
RMDN1-202ENST00000430676 GRIN2BQ13224 1484 aa30.22■■■□□ 2.43
RMDN1-202ENST00000430676 GAPVD1Q14C86 1478 aa30.21■■■□□ 2.43
RMDN1-202ENST00000430676 ABCA5Q8WWZ7 1642 aa30.19■■■□□ 2.42
RMDN1-202ENST00000430676 FBLN2P98095 1184 aa30.19■■■□□ 2.42
RMDN1-202ENST00000430676 PBRM1Q86U86 1689 aa30.17■■■□□ 2.42
RMDN1-202ENST00000430676 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
RMDN1-202ENST00000430676 CHMP7Q8WUX9 453 aaPredicted RBP30.05■■■□□ 2.4
RMDN1-202ENST00000430676 SYNJ2O15056 1496 aa30.05■■■□□ 2.4
RMDN1-202ENST00000430676 RIMBP3CA6NJZ7 1639 aa29.96■■■□□ 2.39
RMDN1-202ENST00000430676 RIMBP3BA6NNM3 1639 aa29.96■■■□□ 2.39
RMDN1-202ENST00000430676 RIMBP3Q9UFD9 1639 aa29.96■■■□□ 2.39
RMDN1-202ENST00000430676 TRIM41Q8WV44 630 aa29.94■■■□□ 2.38
RMDN1-202ENST00000430676 ADAMTS12P58397 1594 aa29.93■■■□□ 2.38
RMDN1-202ENST00000430676 ARHGEF11O15085 1522 aa29.92■■■□□ 2.38
RMDN1-202ENST00000430676 ERICH3Q5RHP9 1530 aa29.91■■■□□ 2.38
RMDN1-202ENST00000430676 CLASP1Q7Z460 1538 aa29.89■■■□□ 2.38
RMDN1-202ENST00000430676 FHAD1B1AJZ9 1412 aa29.84■■■□□ 2.37
RMDN1-202ENST00000430676 GRIN2AQ12879 1464 aa29.84■■■□□ 2.37
RMDN1-202ENST00000430676 KIF27Q86VH2 1401 aa29.77■■■□□ 2.36
RMDN1-202ENST00000430676 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
RMDN1-202ENST00000430676 NUP160Q12769 1436 aa29.71■■■□□ 2.35
RMDN1-202ENST00000430676 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
RMDN1-202ENST00000430676 IGF1RP08069 1367 aa29.68■■■□□ 2.34
RMDN1-202ENST00000430676 CYB5RLQ6IPT4 315 aa29.66■■■□□ 2.34
RMDN1-202ENST00000430676 CUL7Q14999 1698 aa29.6■■■□□ 2.33
RMDN1-202ENST00000430676 ERCC6L2Q5T890 1561 aa29.52■■■□□ 2.32
RMDN1-202ENST00000430676 RUSC2Q8N2Y8 1516 aa29.51■■■□□ 2.32
RMDN1-202ENST00000430676 SHROOM2Q13796 1616 aa29.51■■■□□ 2.31
RMDN1-202ENST00000430676 CARMIL1Q5VZK9 1371 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms