Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.98■■□□□ 1.91
PCDHA4Q9UN74 AC022616.5-201ENST00000518796 181 ntBASIC26.98■■□□□ 1.91
PCDHA4Q9UN74 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.98■■□□□ 1.91
PCDHA4Q9UN74 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHA4Q9UN74 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHA4Q9UN74 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA4Q9UN74 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA4Q9UN74 AC138932.3-201ENST00000567634 1902 ntBASIC26.97■■□□□ 1.91
PCDHA4Q9UN74 MIR6089-201ENST00000616698 64 ntBASIC26.97■■□□□ 1.91
PCDHA4Q9UN74 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA4Q9UN74 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA4Q9UN74 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA4Q9UN74 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA4Q9UN74 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDHA4Q9UN74 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDHA4Q9UN74 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
PCDHA4Q9UN74 AC103834.1-201ENST00000520383 144 ntBASIC26.96■■□□□ 1.91
PCDHA4Q9UN74 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
PCDHA4Q9UN74 MIR4508-201ENST00000584178 70 ntBASIC26.96■■□□□ 1.91
PCDHA4Q9UN74 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDHA4Q9UN74 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHA4Q9UN74 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
PCDHA4Q9UN74 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.95■■□□□ 1.9
PCDHA4Q9UN74 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.95■■□□□ 1.9
PCDHA4Q9UN74 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.95■■□□□ 1.9
PCDHA4Q9UN74 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHA4Q9UN74 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.95■■□□□ 1.9
PCDHA4Q9UN74 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
PCDHA4Q9UN74 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.94■■□□□ 1.9
PCDHA4Q9UN74 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.94■■□□□ 1.9
PCDHA4Q9UN74 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHA4Q9UN74 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.94■■□□□ 1.9
PCDHA4Q9UN74 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.94■■□□□ 1.9
PCDHA4Q9UN74 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHA4Q9UN74 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHA4Q9UN74 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.93■■□□□ 1.9
PCDHA4Q9UN74 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHA4Q9UN74 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHA4Q9UN74 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.93■■□□□ 1.9
PCDHA4Q9UN74 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.92■■□□□ 1.9
PCDHA4Q9UN74 KRT8P33-201ENST00000508125 1423 ntBASIC26.92■■□□□ 1.9
PCDHA4Q9UN74 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.92■■□□□ 1.9
PCDHA4Q9UN74 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.92■■□□□ 1.9
PCDHA4Q9UN74 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.92■■□□□ 1.9
PCDHA4Q9UN74 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA4Q9UN74 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.91■■□□□ 1.9
PCDHA4Q9UN74 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.91■■□□□ 1.9
PCDHA4Q9UN74 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA4Q9UN74 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.91■■□□□ 1.9
PCDHA4Q9UN74 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDHA4Q9UN74 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDHA4Q9UN74 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA4Q9UN74 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
PCDHA4Q9UN74 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDHA4Q9UN74 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PCDHA4Q9UN74 AP003733.4-201ENST00000623785 1697 ntBASIC26.89■■□□□ 1.9
PCDHA4Q9UN74 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHA4Q9UN74 AC090877.2-201ENST00000558441 1738 ntBASIC26.89■■□□□ 1.9
PCDHA4Q9UN74 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.89■■□□□ 1.9
PCDHA4Q9UN74 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.89■■□□□ 1.9
PCDHA4Q9UN74 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHA4Q9UN74 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
PCDHA4Q9UN74 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.88■■□□□ 1.89
PCDHA4Q9UN74 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.88■■□□□ 1.89
PCDHA4Q9UN74 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.88■■□□□ 1.89
PCDHA4Q9UN74 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA4Q9UN74 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
PCDHA4Q9UN74 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA4Q9UN74 YBX1P4-201ENST00000392794 808 ntBASIC26.87■■□□□ 1.89
PCDHA4Q9UN74 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA4Q9UN74 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA4Q9UN74 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA4Q9UN74 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.86■■□□□ 1.89
PCDHA4Q9UN74 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.86■■□□□ 1.89
PCDHA4Q9UN74 AC011551.1-201ENST00000614101 683 ntBASIC26.86■■□□□ 1.89
PCDHA4Q9UN74 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.86■■□□□ 1.89
PCDHA4Q9UN74 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA4Q9UN74 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA4Q9UN74 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA4Q9UN74 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
PCDHA4Q9UN74 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA4Q9UN74 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA4Q9UN74 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA4Q9UN74 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA4Q9UN74 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA4Q9UN74 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDHA4Q9UN74 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.84■■□□□ 1.89
PCDHA4Q9UN74 KRT18P24-201ENST00000344739 1156 ntBASIC26.84■■□□□ 1.89
PCDHA4Q9UN74 AC120024.1-201ENST00000562672 995 ntBASIC26.84■■□□□ 1.89
PCDHA4Q9UN74 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA4Q9UN74 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA4Q9UN74 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA4Q9UN74 AC103724.3-201ENST00000564481 992 ntBASIC26.83■■□□□ 1.89
PCDHA4Q9UN74 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
PCDHA4Q9UN74 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.82■■□□□ 1.88
PCDHA4Q9UN74 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA4Q9UN74 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA4Q9UN74 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA4Q9UN74 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA4Q9UN74 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms